Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181751g00005 ATGAAGAAACCAACTTCTACTTCTAACTCTTCTTCTGCTACCCTTCTCCTTCTTCCCTTTGCAACCTCTTTCATATTCTCCATTGCTCCTTGCAAGAACTTCCCCATTGCTCATGGTTTTGCTCTCTTCTTCACACCTGTCATGGCCATCCATGGTGAACTCACAGGCAACTACTTGGGACTGTTTAACCGTTCCACAGCAGGTAATGCCTCAAACCATGTGTTTGCTATTGAGTTTGATGATTTTAGGAATGAAGAGTTCAATGAATTGAATGATAACCATGTTGGTGTTGATGTGAATTCAATGATCTCTGAGTATTCTGAACCTGCTGGGTTTTGGGGTGGCAAAGATGGTGAAACAATGGAGGAATTGAAGCTTGCTAGTGGTGAAAATTATCAGGTTTGGATTGAGTTTGATGGTTCTCATATCAATGTTACTATGGCCATAGCAGGGCATAGGAAGCCTCAAAGGCCTTTGATTGATAATAAGCCTATTAACCTTTCTGGGGTTTTCTTGGATGAGATGTATGTGGGGTTTTCTGGGGCAACTGGGAGAATGGTTGATGAGTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCGAATTTTTCGATCGGTGATGCTTTGCACACCAACCATTTGCCTTTATTCCTGCATCCAAAGGCATTGATTTATAGATCAAAGTTTTTCATTTTGGGGGTCATTTTTGGTGGGTTGATACTTATTGGCTGTGGTACTTTGGTGTTTATGAGTTTATCAAGAACCAAAGGAAAAAGAGAACAGGTTGAAGATTGGGAATTGGAGTATTGGCCTCACAGGATTAGCTATGAAGAGATTTGCACCGCGACGAATGGATTCTCTGAGGAGAATGTGATTGGGAAGGGGACAAGTGGGAGAGTTTACAAGGGAGTGTTGAAAGGTGTAGAAGTCGCGGTGAAGAGATTCAACCATGAAACGCAGCACGAGATGAGAGAGTTTCTGGCAGAGATATCAAGCCTAGGGAGAATGAAACACAGGAATTTGGTTGGTTTCAGAGGATGGAGCAAAAGAAAAGGAGGGAAATTGATCCTTGTATATGATTATATGGTGAATGAGAGCTTGGATAAGATGATTTTCGAGTGTGAAGATGATACCATGATACTGAGCTGGGAACTCAGGCTCAGTGTGCTTCAAAATGTAGCTTGTGGAATTTTGTACCTACATGAAGGCTGGGAATTCGAGGTCTTGCATAGAGATATTAAAGCGAGTAATGTACTACTCGACAAGGATATGAACGCAAGATTGGGAGATTTCGGCCTAGCCAGGCTGCATCGACAGGAAAACGTTGCTGACACAACAAGAGTGATTGGAACTCTGGGCTACATGGCACCAGAGCTAGTCCGAATCAGTCGACCATCAACTGTTACGGATGTGTATAGTTTCGGAATATTGGTCTTGGAAGTGGTGTGTGGGAGAAGGCCTATTGTGGTAGATCAGCCTGCATTGGTTGATTGGGTATTTTCACTTATGGAGAAAGGGCAATTGAGTTTGGCCATTGATGAGAGGCTGAAGAATCAAAGTGGTTTCAGAACTGAGGAAGCTGATAGAGTGTTGCATTTGGGTTTGTTATGTGCAAGTTCAGACCCTGGTATTAGGCCAGCAATGAGGCAAGTGGTGAAAATTTTGGAAGGAATAAGAAACGGTGATTGTAATGATGCATGCATCAATATGAGTCTTCTTGGGAAAATAAACTCAGCAGCATCATGGTCTAGGAGTTCAACAAGTTCTGCCACTGTGAATTATCCTACTTTTGATGAAATTTTGCAGACTAAGTTCTATTCAACAGCATCTCAAAGCATCTCTTATCCAAGCCTACAGCCAAATTCTGGATCACTCTCAGAAGGAAGATGA 1887 0.4229 MKKPTSTSNSSSATLLLLPFATSFIFSIAPCKNFPIAHGFALFFTPVMAIHGELTGNYLGLFNRSTAGNASNHVFAIEFDDFRNEEFNELNDNHVGVDVNSMISEYSEPAGFWGGKDGETMEELKLASGENYQVWIEFDGSHINVTMAIAGHRKPQRPLIDNKPINLSGVFLDEMYVGFSGATGRMVDECRILAWSFSNSNFSIGDALHTNHLPLFLHPKALIYRSKFFILGVIFGGLILIGCGTLVFMSLSRTKGKREQVEDWELEYWPHRISYEEICTATNGFSEENVIGKGTSGRVYKGVLKGVEVAVKRFNHETQHEMREFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKMIFECEDDTMILSWELRLSVLQNVACGILYLHEGWEFEVLHRDIKASNVLLDKDMNARLGDFGLARLHRQENVADTTRVIGTLGYMAPELVRISRPSTVTDVYSFGILVLEVVCGRRPIVVDQPALVDWVFSLMEKGQLSLAIDERLKNQSGFRTEEADRVLHLGLLCASSDPGIRPAMRQVVKILEGIRNGDCNDACINMSLLGKINSAASWSRSSTSSATVNYPTFDEILQTKFYSTASQSISYPSLQPNSGSLSEGR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181751g00005 628 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 200 IPR013320 -
Stsc181751g00005 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Stsc181751g00005 628 Pfam Legume lectin domain 14 201 IPR001220 GO:0030246
Stsc181751g00005 628 Gene3D Phosphorylase Kinase; domain 1 248 360 - -
Stsc181751g00005 628 Gene3D Transferase(Phosphotransferase) domain 1 361 570 - -
Stsc181751g00005 628 FunFam L-type lectin-domain containing receptor kinase S.4 361 565 - -
Stsc181751g00005 628 Gene3D - 1 201 - -
Stsc181751g00005 628 SMART serkin_6 285 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181751g00005 628 PANTHER - 12 558 - -
Stsc181751g00005 628 ProSitePatterns Protein kinases ATP-binding region signature. 291 312 IPR017441 GO:0005524
Stsc181751g00005 628 ProSiteProfiles Protein kinase domain profile. 285 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181751g00005 628 Pfam Protein kinase domain 286 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181751g00005 628 CDD lectin_legume_LecRK_Arcelin_ConA 20 200 IPR001220 GO:0030246
Stsc181751g00005 628 SUPERFAMILY Protein kinase-like (PK-like) 259 555 IPR011009 -
Stsc181751g00005 628 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 246 360 - -
Stsc181751g00005 628 CDD STKc_IRAK 291 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181751g00005 Stsc-Chr181751 18280 20166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181751g00005 17 509 Receptor kinase-like Gene Family AT4G04960 53.908 2.41e-177 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc181751g00005 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181751g00005 - - gmx:100804025 928.702