Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181747g00002 ATGGGGTTTCTGTGTCTGAGGAAGAAGGCCTTGATGAATTCTACAAGAAGTTTGTGGAGTCAAGNNNNNNNNNNTGTGAAGCTTGGGGAGAAGTGCACAATCATGATGTATGGACCGACGGGTTCCGGAAAGAGTCACACTATGTTTGGGTGCTCAAAGGAGCCAGGGATTGTGTATAGGTCTTTGAGGGACATTCTTGGAGATGAGGGTGGGGATGGAGACAGTGGCTGTCTTGGGTTGGGGAATTTTGTTCAGGTTACAGTTTTGGAGATCTACAATGAAGAGATTTATGATCTTTTGCCCACCAATGGCGGCGGAGGTGGCGGGTTTGGATTGGGATGGCCTAAGGGAAGTGGTTCCAAGGCAAAACTTGAAGTGATGGGGAAGAAAGCAAAGAATGCAACATATATATCTGGAAATGAAGCAGGGAAGATCTCGAAAGAAATTCAGAAAGTGGAGAAACGAAGGATTGTTAAAAGCACACTCTGCAATGACAGGAGTTCTAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTCGGAGGGCGGCTGATGCTTGTAGATATGGCTGGATCAGAAAATATTGAGCAAGCTGGTCAAACTGGCTTTGAGGCCAAAATGCAGACTGCAAAGATCAATCAAGGAAATATTGCCCTAAAGAGAGTGGTTGAGTCCATTGCTAATGGCGATTCACACGTGCCCTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGACAAGTCGAAAATCCTAATGATACTCTGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCAACACTTGAATATGGTGCAAAAGCTAAGTGTATCGTCCGTGGTCCTCATACCCCAGGCAAGGAGGAGGAATCCTCTTCTGCTGTCATTTTGGGCTCAAGAATTGCTGCTATGGATGAATTTATCTTGAAGCTGCAAATGGAAAACAAGCTCAGAGAGAAGGAGCGAAATGAAGCGCACAAAAAGCTCCTAAAGAAAGAAGAGGAGGTTGCTGCGTTAAGAGCTAGACTGGAGATCACAGAAGCTAAAGGAGCTTCCAAAAGCGAGGAGGAGATTAACTTGAAGGTGAATGAAAGAACTCGGCATCTGAGACAGGAGTTAGAGAAGAAGCTGGAGGAGTGCCAGAGAATGACTAACGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAACTTCTGAGAAAGCGACTGGAGGAAATAGAAATGCAGCTGTCTCGCTCCAGTGAGGGTTTTAAAGAGGTAAATTCATCAAAGGAAATGGAATCAAATGGTTTTGTGAGAAGGCTGTTGCGAATATACAAAAGCGAGGAGGATCCAGGGATGGTGAAATCAATGGATTTGGACATGGATGATCAGGAACAGCTAGTTCCCAATGAAGTAAAAATTGTTGGCTTATGCAGGAGCGATTACAATGTTCAAGATGTACAAGATGCCACTGTTTGTACACCATTCTTTGGACAAGGACTGAGTCTTAGTACAGTTTTTGAAGATGAAGAAGAAGAACATGATGATAATGAAGAGGAAGGTGAAGACAGGGAAGTGGAGAAAGAAGTAATAGAGGAAAAGAGAGTATGCACTGTTGTTGACAGCAGCAACAAGTCTTCTAGCATTGCTGCAGCCTCAGAGGAATGTGATGATAGATTAATGAGAATCCAAAACATATTCACACTCTGTGGAAACCAAAGAGAGCTTTCACGGCACAATGAAACGCCCAAACTAGCAGCAAAGAAGTGTTCTTCTGATGACACATTTGGTCTCAGGTTTTCTCCTGTGATGAAGGCAGCTGACAAAGATTGTGTTATAAAAACTTGCAACAAGGAAAATATGGACCCAAACAATGTTGCAGGATTAGGAAATTAG 1929 0.4344 MGFLCLRKKALMNSTRSLWSQXXXXVKLGEKCTIMMYGPTGSGKSHTMFGCSKEPGIVYRSLRDILGDEGGDGDSGCLGLGNFVQVTVLEIYNEEIYDLLPTNGGGGGGFGLGWPKGSGSKAKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPGKEEESSSAVILGSRIAAMDEFILKLQMENKLREKERNEAHKKLLKKEEEVAALRARLEITEAKGASKSEEEINLKVNERTRHLRQELEKKLEECQRMTNEFVELERRRMEERILQQQEEVELLRKRLEEIEMQLSRSSEGFKEVNSSKEMESNGFVRRLLRIYKSEEDPGMVKSMDLDMDDQEQLVPNEVKIVGLCRSDYNVQDVQDATVCTPFFGQGLSLSTVFEDEEEEHDDNEEEGEDREVEKEVIEEKRVCTVVDSSNKSSSIAAASEECDDRLMRIQNIFTLCGNQRELSRHNETPKLAAKKCSSDDTFGLRFSPVMKAADKDCVIKTCNKENMDPNNVAGLGN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181747g00002 642 Pfam Kinesin motor domain 29 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 Coils Coil 320 356 - -
Stsc181747g00002 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 422 IPR027417 -
Stsc181747g00002 642 Gene3D Kinesin motor domain 16 288 IPR036961 -
Stsc181747g00002 642 ProSiteProfiles Kinesin motor domain profile. 1 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 PRINTS Kinesin heavy chain signature 184 202 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 PRINTS Kinesin heavy chain signature 161 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 PRINTS Kinesin heavy chain signature 29 50 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 PRINTS Kinesin heavy chain signature 234 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181747g00002 642 Coils Coil 370 426 - -
Stsc181747g00002 642 PANTHER KINESIN-RELATED 29 537 IPR027640 GO:0003777|GO:0007018
Stsc181747g00002 642 SMART kinesin_4 4 293 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181747g00002 Stsc-Chr181747 13908 17089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181747g00002 29 295 Calmodulin-binding Proteins AT5G65930 28.723 1.76e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181747g00002 - K10398 gmx:100779567 796.964