Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181743g00004 ATGGGGAAACTTTTCTGGCTTGCTATTGCTATACCCCTTGTTTTAACCAACTGTGTTGCTGCTTTTCAATGGTATCAATATGAATATCACCACTTCAATGAAACGCAGCTGTCATTGCTGGAAGCCGATGAATCTTTGTTTCAGAGCAATACTCTCTTCGTTGGACTCAACCTTATTCATACTGCTGCTGCCAAAGGAGTAGTTTGCTTGGATGGAACTTTTCCTGCTTATCATTTTCATCGGGGATATGGATCAGGAGCAAATACTTGGCTTAGAAATTTAGAGGTTTCATCACTTTAG 300 0.4033 MGKLFWLAIAIPLVLTNCVAAFQWYQYEYHHFNETQLSLLEADESLFQSNTLFVGLNLIHTAAAKGVVCLDGTFPAYHFHRGYGSGANTWLRNLEVSSL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181743g00004 99 PANTHER NOTUM-RELATED 36 95 IPR004963 GO:0016787
Stsc181743g00004 99 Pfam Pectinacetylesterase 48 95 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181743g00004 Stsc-Chr181743 12694 13144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181743g00004 1 95 Carbohydrate Esterase AT1G57590 41.414 5.23e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181743g00004 K19882 - gmx:100810716 116.701