Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181742g00004 ATGGGATGGCCTCTTTTTGGAGAAACCACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAACCAGAGAACAAGGTATGGAAGTTTTTTCAAATCACACATACTTGGGTGTCCTACCATAGTGTCAATGGATCCAGAGCTGAACAGATTCATTCTGATGAATGAAGCAAAAGGGCTTGTTCCTGGTTACCCTCAATCCATGTTGGATATCTTAGGAAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGTGCACTGTTATCCATCATTAGCCCTTCTTTCATCAGAGATCAGCATCTCCCTAAGATTGATCACTTCATGAGATCTTTTCTCACTCATTGGGATAACAAGATCATCAACCTTCAAGACAAAACCAAAGAGATGGCATTTCTGTCATCACTTAAGCAGATTGCTGGCATGGAATCTAGCTCAATATCTCATCCATTCATGACAGAGTTCTTTAAGCTTGTTCTAGGAACACTCTCCTTGCCTATTGATCTTCCAGGAACAAATTATCGCCGGGGATTACAGGCAAGGAAGAACATAATTAGCATTCTGAGTGAGTTGGTGGATGAAAGGAAAGCATCCCAAGAAACACACCAAGACATGCTTGGTAGCTTGATGATGGGGAGAAGAGAAAACAGATACAAATTAACTGATGAAGAGATCATTGATCTCATCATCACAATCATGTATTCTGGTTATGAAACTGTCTCTACTACATCAATGATGGCAGTGAAGTACCTCCATGATCATCCCAAAGTTCTTGAAGAAATGAGAAATGAGCATTTTGCTATAAGAGAGAGGAAGAAGCCTGAGGATCCAATTGATTGCAATGATCTTAAGTCAATGAGGTTCACTCGTGCGGTAATTTTTGAGACCTCGAGATTAGCCACAATAGTCAATGGTGTTCTGAGAAAAACAACTCATGACATGGAACTAAATGGGTATTTGATTCCTAAGGGTTGGAGAATATATGTATATACAAGAGAGATAAATTATGACCAGTTTCTGTATCAAGATCCACTCACATTTAATCCATGGAGATGGCTGGGAAACAGCTTAGAGTCACAAAGCCACTTCTTGGTATTTGGAGGAGGCACTAGGCAGTGTCCAGGGAAAGAGTTGGGAATTGCAGAAATTTCTACTTTCTTGCATTATTTTGTAACTAGATACAGGTAA 1200 0.3992 MGWPLFGETTEFLKQGPNFMKNQRTRYGSFFKSHILGCPTIVSMDPELNRFILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPSFIRDQHLPKIDHFMRSFLTHWDNKIINLQDKTKEMAFLSSLKQIAGMESSSISHPFMTEFFKLVLGTLSLPIDLPGTNYRRGLQARKNIISILSELVDERKASQETHQDMLGSLMMGRRENRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEMRNEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDQFLYQDPLTFNPWRWLGNSLESQSHFLVFGGGTRQCPGKELGIAEISTFLHYFVTRYR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181742g00004 399 Pfam Cytochrome P450 3 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 CDD CYP90-like 23 399 - -
Stsc181742g00004 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 370 379 IPR017972 GO:0005506|GO:0016705
Stsc181742g00004 399 SUPERFAMILY Cytochrome P450 2 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS P450 superfamily signature 368 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 FunFam Cytochrome P450 85A1 1 399 - -
Stsc181742g00004 399 Gene3D Cytochrome P450 1 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 24 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 294 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 377 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 367 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181742g00004 399 PANTHER CYTOCHROME P450 26 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181742g00004 Stsc-Chr181742 37101 39495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181742g00004 44 399 Cytochrome P450 AT5G38970 70.588 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181742g00004 K09590 - gmx:100785414 721.079