Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181741g00008 ATGGGTGAAATAATTTCTGGTGCGGTGGCAACACTTTTGGCCAATCTTACAACAAAATCATTTAAAGAGATTGCTCTGGCATGTGGTCTTAGAGATGATGTAGAAAAGTTTCAAAGTTCTTTGAGAATCATCAACGGATATCTTTTAGATGCCGAGAACAAGCAAGCAAAGAACAATAATGTAGCTGATTGGTTGAAAGACCTTAGAAAGGCATTCGATGAAGCTGGTGATATATTGGATGAAATAGAATATGACTCAAAACGGAATGAAGTGGTCAGAATGTATGGAAGCATTAGCATGAAGGTACGCCGGTTCTTCTCATACACAAGTAATCCACTTGTCTTTCGCATCAGAATGGCTCACAAAATCAAAGATATGAAACAAAAGATAGATCAAAAAGCAAATGAAGGGAGAACTTTGGGCATAGTGGAACAACATATCAACACTCCAACAGTGGAGCGCAATTTACCATGGCGAGAAACTAGCTCTTCGTCGCCGTTGCGCGTGTGTGGAAGACATGAAGAGAAAGAGGAGATTATAAAGTTTTTAATGGGACAACAACCAGAGGCTACTAATGTTGATGTGATATCGATTGTTGGGATCGGAGGTTTGGGAAAAACTACACTTGCTCAAATGGTTTATGATGATGATAGAGTGAAGCAGCATTTTAATATGCTGATGTGGGTGTGTGTCTCTGATGATTTTGATGTGAAGATGTTAATACAAAAGATTATTCATGCTACCTCAAGGACAGAGAATGTGGTTGATGCAAATTCTAGTTTGGAACATATGGTGTCTCTTCTCAATGAAAAGTTACGTGGTAAGAAGTTCTTACTTGTGCTAGACGACGTTTGGAATGAAGACCACAACAAATGGGATGAATTCAGAAATCACTTGTTGAAGGCAGGGAGTGACACAGAATCAAAAGGGAGCAAAATCATAGTGACTACACGCATCCGCGAAGTTGTTGATATTGTTGGAGGCGGTTTTTCAATCAATTTAAAAGCACTTCATGAAGATGAATGTTGGAAACTGTTTGTCAAATGTGCATTCCAAGAAGAGAGCGAAGAAGAGAAGTACCCAAGGCTAAAGAAAATTGGGGTGGAAATTGTTGAAAAGTGCAAAGGAGTGCCCTTAGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAGACCCCGTGATGAAAATGAGTGGAGAAAAATAAGAGATAATGAGGTGTGGGAACTCGATAAAAAAAAAAAAACTGGCATTTTGCCATCATTGAGATTGAGTTATAATCACTTGCCACCGGAAGTAAAGCAATGTTTTTCATACTGCTCTTATTTTCCAAAGGATTACAAATATCTAGTTATTGAGCTGATTATGTTTTGGATGGCACATAGACTCCTCCAACCTACACATGAGGATGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCATTACTTCAAATTGAAGAAGATTTCGAATATTCAATGTCATTTAAAAGACTCAAAATGCATGATCTTGTACATGATCTTGCAAAATCAACGATGCAAAAGTCAAGCAAGACAAGAACTGTTGTGCAAGAAGGGGAACAAGATACATCTACAGAATGGGCCTCCAACAAATTCAACTATCTGAAGGTGTTGCACTTAACATATATCAAGTCGAGCCCGTTGCCTGATGATTTTTTTGAGACAACAAAGAAGCACTTGAGATTTCTCAATCTAACATCTTGTCCTATTTCTGAAAAACTCTCTGATTCCATTTGCAAGCTACAAATTTTGCAGAGTTTGAAATTTGTGGTTTCTAACAAGAACCATACCCTTCCCAAAGACATGAAAAATCTCATCAGCCTTCAATATTTGCATTTGGCAGTTGAAGTTACAAGTTTGTCCTCAATGAACATGGGGCGCTTCCAACAACTCAAATTCTTATATCTCGACGGTTGTTCAGAGTTAGTGTCTGTACCAAGTGTTGTTGGTCGCTTGACTATAAAGAAATTCATTATTCATTGGTGTAATAATTTGGTGAGTTTTGAGGATGAAGAGGAAGAAAGAAAGGAACACGTGGCACTCTATAACTCAAACCTTCAATTATTCGATATCATTGGAGCAGTGAAATTGGAAACTTTACCTAATTGGCTTGAAAGAGCTACTAAATTGCGATATTTGAGGGTATCCGTTACAAGTATAAAATCATTTTCCACAAGGTTGTCAATGGCCTCTCTTGAACAACTTCATATCACTGATTGTCGAGAATTGTCATCTCTTCCAGACAACATGGATCAAACTCATAGTCTTCAGTTTTTGGAAATAATTAATTGTCCTATACTAAACCCAAGGTATAATAAGATGACAGGTTCGGATTGGGCCAAAATTGCTCATATCCCACGTTGCAAGATTGATGGGGTTGATCAAAATGAAGATTGA 2433 0.3781 MGEIISGAVATLLANLTTKSFKEIALACGLRDDVEKFQSSLRIINGYLLDAENKQAKNNNVADWLKDLRKAFDEAGDILDEIEYDSKRNEVVRMYGSISMKVRRFFSYTSNPLVFRIRMAHKIKDMKQKIDQKANEGRTLGIVEQHINTPTVERNLPWRETSSSSPLRVCGRHEEKEEIIKFLMGQQPEATNVDVISIVGIGGLGKTTLAQMVYDDDRVKQHFNMLMWVCVSDDFDVKMLIQKIIHATSRTENVVDANSSLEHMVSLLNEKLRGKKFLLVLDDVWNEDHNKWDEFRNHLLKAGSDTESKGSKIIVTTRIREVVDIVGGGFSINLKALHEDECWKLFVKCAFQEESEEEKYPRLKKIGVEIVEKCKGVPLAITTLGCLLRSRPRDENEWRKIRDNEVWELDKKKKTGILPSLRLSYNHLPPEVKQCFSYCSYFPKDYKYLVIELIMFWMAHRLLQPTHEDEDAEDIGELYIKKLVSASLLQIEEDFEYSMSFKRLKMHDLVHDLAKSTMQKSSKTRTVVQEGEQDTSTEWASNKFNYLKVLHLTYIKSSPLPDDFFETTKKHLRFLNLTSCPISEKLSDSICKLQILQSLKFVVSNKNHTLPKDMKNLISLQYLHLAVEVTSLSSMNMGRFQQLKFLYLDGCSELVSVPSVVGRLTIKKFIIHWCNNLVSFEDEEEERKEHVALYNSNLQLFDIIGAVKLETLPNWLERATKLRYLRVSVTSIKSFSTRLSMASLEQLHITDCRELSSLPDNMDQTHSLQFLEIINCPILNPRYNKMTGSDWAKIAHIPRCKIDGVDQNED 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181741g00008 810 Gene3D - 425 513 IPR036388 -
Stsc181741g00008 810 FunFam Probable disease resistance protein At1g63360 425 516 - -
Stsc181741g00008 810 PRINTS Disease resistance protein signature 271 285 - -
Stsc181741g00008 810 PRINTS Disease resistance protein signature 195 210 - -
Stsc181741g00008 810 PRINTS Disease resistance protein signature 739 755 - -
Stsc181741g00008 810 PRINTS Disease resistance protein signature 374 388 - -
Stsc181741g00008 810 Pfam NB-ARC domain 174 404 IPR002182 GO:0043531
Stsc181741g00008 810 Gene3D - 154 327 IPR027417 -
Stsc181741g00008 810 Gene3D - 7 124 - -
Stsc181741g00008 810 SUPERFAMILY L domain-like 496 780 - -
Stsc181741g00008 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 439 IPR027417 -
Stsc181741g00008 810 PANTHER DISEASE RESISTANCE PROTEIN RP 69 776 IPR044974 GO:0006952
Stsc181741g00008 810 Pfam Rx N-terminal domain 8 90 IPR041118 -
Stsc181741g00008 810 Gene3D - 336 424 IPR042197 -
Stsc181741g00008 810 FunFam Probable disease resistance protein At1g61300 152 327 - -
Stsc181741g00008 810 Gene3D Ribonuclease Inhibitor 693 790 IPR032675 -
Stsc181741g00008 810 Gene3D Ribonuclease Inhibitor 514 692 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181741g00008 Stsc-Chr181741 32748 35971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181741g00008 180 786 WRKY Transcription Factor Family AT5G45050 21.638 5.04e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181741g00008 - - adu:107472938 1096.65