Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181740g00004 ATGATGGTCAACACCATATGTGAAGCTTGTGCAAAAGGATCCATTGTGAACCTATCTAAGATTATCATTAAAACCACAAACAACATAGCTTCAAAATGCATTTTTGGGAGAAGTTTTGAAACAAGTGATGGTAGTGATAATGATGGTAGAAAATCCATTGGAGAAGTAGTGAGGAAAATGACGTCACAATCAACAACACTTGGGATTGGAGACTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACCGGTTTCAACTCAAGATTGAAGGATACTTATGTCGAATTAGATTCCATTTTGGAAGAGGTTATTGAAGAGCACAAGATAAAGAAAAGGAACAAGAATATCAATGATCGTTCTTATGAAAATAAAGATTTTGTTGATATATTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCACCGGAGATACCATGAAAGGAATCCTCATGGACATGTTTGTGGGAGGAAGTGATAGTGTTTCAACTGCTATTGAATGGGCTTTTGCCGAGCTTGCAAAGAACCCAAATAGCATGAAAAAAGCTCAAGAAGAGGTGAGAAGAATTGTGGATGGAAAATTCAAGATAGAGGAAAATCATCTAAATCAAATGAACTACATGAAGTGTGTAATCAAAGAAACCCTAAGATTACATCCACCGGTTCCACTTTTGCTCCGTATAAAAACATCAACTAATGTTGTGAAAATCAATGACTACAACATTCCCAAGGAAATAACCGTGTATGTGAATTCATATGCAATTCATAGGGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTGATAATAATAACCAACAATTTGATTATAAGAAGGTAATAAATTTTAAATTAATTCCATTTGGTTTTGGGAGAAGGGGGTGTCCTGGAGCTTCATTTGGGATTGCATCTGTTGAATATTTGATGGCTAATCTTTTATATTGGTTTGATTGGAAGGTTCCTAATAATAATAATAGTAATGGTGATGATGATGATGTAGAAATGGATATGAGTGAGATGAGTGGAATGACAGTCACCAAGAAAGAACCACTTTATCTTAGGCCAACACTTTACTCATCATTTGATTCTAAATCTTGA 1122 0.3538 MMVNTICEACAKGSIVNLSKIIIKTTNNIASKCIFGRSFETSDGSDNDGRKSIGEVVRKMTSQSTTLGIGDLFPSLDWVDVLTGFNSRLKDTYVELDSILEEVIEEHKIKKRNKNINDRSYENKDFVDIFLQLQERDMLEFELTGDTMKGILMDMFVGGSDSVSTAIEWAFAELAKNPNSMKKAQEEVRRIVDGKFKIEENHLNQMNYMKCVIKETLRLHPPVPLLLRIKTSTNVVKINDYNIPKEITVYVNSYAIHRDPKLWDNAEEFIPERFEGDNNNQQFDYKKVINFKLIPFGFGRRGCPGASFGIASVEYLMANLLYWFDWKVPNNNNSNGDDDDVEMDMSEMSGMTVTKKEPLYLRPTLYSSFDSKS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181740g00004 373 PRINTS P450 superfamily signature 158 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS P450 superfamily signature 294 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS P450 superfamily signature 211 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PANTHER CYTOCHROME P450 71B11-RELATED 5 364 - -
Stsc181740g00004 373 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 296 305 IPR017972 GO:0005506|GO:0016705
Stsc181740g00004 373 Gene3D Cytochrome P450 1 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 SUPERFAMILY Cytochrome P450 2 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 303 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 293 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 252 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 147 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 167 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 PRINTS E-class P450 group I signature 25 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00004 373 Pfam Cytochrome P450 2 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181740g00004 Stsc-Chr181740 24816 28361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181740g00004 1 366 Cytochrome P450 AT1G13110 36.927 4.41e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181740g00004 K20617 - aip:107632412 456.832