Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181740g00003 ATGTTGCTTCACCTTGGCCACCTTCAAGTTTTGGTGGTTTCCTCCGCGGAATTGGCGAAAGAAGTCATGCAAGCAAACGATGTGGTTTTCGCTAGCCGGCCGCACCTCACCGCCGGTAGGGCCTTGCTCTACGGTTGTAAGGACGTCGCGTTCGAATCCTACGGCGAAGCATGGAGACAGAAAAGGAAGCTTTGTGTTCTTGAGTTACTTAGTGCTAAAAGGGTTCAATTGCTCCAATTTATACGAGAAGAGGAGGTTTCATTATTAGTTAAGAAATTAGATGAATCTTGCATGAATATTAATAATAGTAGTTGTAGTAATTCTACTAATTATGTGAACCTTAGTGAGATGATAATTGCAACAACAAACAACATTGTAAGTAGGTGTTTATTTGGAAGGAAGTACTATGATCTAGAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTTTAGGTTTGGTGAGCTTGTGAGGAAGGTAATGACTCAACTATTGGATTTAGGTATTGGAGATCTTTTTCCTTTGTTGGGTTGGGTTGATGTTCTAATTAGTGGAAGGGTTAAGAGGTATAGGGACACTTTTGAAGTGCTGGATGCTTTCTTTGATCATGTAATTGAGGAGCATAAGATTGCAAGCAAAGAGGAGGAGGAAGATAATAATAATAATAAGAAGAAAGACTTTGTGGACATTCTTCTTCAACATCAAAAGGCTACTATGCTTGACTTTGAGCTTGGTGATGATGATCTTAAGGACATGTTTTTGGGAGGAAGTGATACAACTTCAACAACACTAGAATGGGCTATGACAGAGCTTATGAGAAATCCAATCAAAATGAAAAAGGCCCAAGATGAGGTAAGAAGAGTTGTTGGCATCAACAAATCAAAATTAGAAGAAAATGATATTAATCAAATGAATTACTTAAAATGTGTCATCAAAGAAACCCTAAGGTTACATCCAGCTGCTCCTCTTTTGACTCCAAGAGAAACAACTTCTAAGACTAAACTCCATGGCTATGATATTCCCCAAAAAACAATGGTTTATGTTAATGTGTGGGCAATTCAAAGAGATCCTCAACTTTGGGAAAATTCTGAAGAATTCTTACCTGAAAGATTTGAAGACAATGAGGTTAATTTCAATGGCAAATACTTTCAATATATACCCTTTGGTTCTGGAAGAAGAAAATGCCCTGGAATGACATTTGGCCTTACTTCAATTGAGTATATGCTTTCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTACTCAAAGTGATGGTGTACCTGGTCATGCCCTAGATATGTCTGAGATCTTTGGCCTCACTGTCAATAGGAAAGTACCACTTTTTCTTCAACCAATGCCATATTGCAACGGTGATGACTACTCGAATGAAAACGTGTGCGTCTAA 1437 0.3646 MLLHLGHLQVLVVSSAELAKEVMQANDVVFASRPHLTAGRALLYGCKDVAFESYGEAWRQKRKLCVLELLSAKRVQLLQFIREEEVSLLVKKLDESCMNINNSSCSNSTNYVNLSEMIIATTNNIVSRCLFGRKYYDLENNNNNNNNNNNNNNNNNNNNNFRFGELVRKVMTQLLDLGIGDLFPLLGWVDVLISGRVKRYRDTFEVLDAFFDHVIEEHKIASKEEEEDNNNNKKKDFVDILLQHQKATMLDFELGDDDLKDMFLGGSDTTSTTLEWAMTELMRNPIKMKKAQDEVRRVVGINKSKLEENDINQMNYLKCVIKETLRLHPAAPLLTPRETTSKTKLHGYDIPQKTMVYVNVWAIQRDPQLWENSEEFLPERFEDNEVNFNGKYFQYIPFGSGRRKCPGMTFGLTSIEYMLSNLLYWFDWKLPTQSDGVPGHALDMSEIFGLTVNRKVPLFLQPMPYCNGDDYSNENVCV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181740g00003 478 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Stsc181740g00003 478 FunFam Cytochrome P450 99A2 1 463 - -
Stsc181740g00003 478 PANTHER CYTOCHROME P450 71B11-RELATED 1 463 - -
Stsc181740g00003 478 Pfam Cytochrome P450 3 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 CDD CYP71-like 1 458 - -
Stsc181740g00003 478 Gene3D Cytochrome P450 1 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181740g00003 478 Coils Coil 215 235 - -
Stsc181740g00003 478 SUPERFAMILY Cytochrome P450 2 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181740g00003 Stsc-Chr181740 13451 15289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181740g00003 1 462 Cytochrome P450 AT3G26210 41.026 3.62e-115 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181740g00003 K20617 - qsa:O6P43_022640 494.967