Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181733g00002 ATGGCTACGAAATCTTGCTGCACACCTAAGAAGCCGTCTTCCACAAACCCCGTTTCGGTTTCCAAGGTCAGAGTCATCGTCAGGGTTAGACCCTTTCTTCCTCATGAGATCTCTTCTAGAAACGCCAACCCCGTTCCCTGCGTCTCCGTCCTCGACCAACATTTCGAATCTGCACAAGATGAAGTTGCCGTTTATCTCAAAGATCCGCAAACCAGCCGAAAGGAGTGCTACCAATTAGACTCATTCTTTGGAGAAGAAGATAACAATGTGGGTCAGATATTCAGCAGAGAAGTGAGTCCTATGATACCCGGAATCTTCAAGGGTTGCAATGCCACGGTTTTCGCTTATGGAGCTACTGGCAGTGGCAAGACATACACCATGCAGGGGACTAACGAACACCCTGGCTTGATGACACTAGCAATGTCTATGATATTGTCCATTTGTCAAAGCAGTGGACGCACTGCAAGTATTTCATACTATGAGGTCTACATGGACAGATGCTATGACCTCTTGGATGTCAAAGAAAAAGAGATTTCAGTTTGGGATGACAAAGATGGCCAAATCCACCTCCGTGGACTCTCTCAAGTTCCCATACACACGATGTCTGACTTTCATGATGTTTTCTCGAGTGGAGTTCAGCGGCGAAAAGTTGCTCACACTGGCCTCAATGATGTCTCTAGTAGGAGCCATGTAGTCCTTGTGATCTCTGTCTCCACTCCTTCTGCTGATGGCACCGGAGCAGCTGTATTCGGAAAGTTGAATCTCATTGACTTGGCAGGTAACGAAGACAACAGAAGGACCTGCAATGAAGGGATCCGTCTCCAAGAGAGTGGTAAGATAAACCAATCCTTGTTTGCACTGTCAAATGTGATCTATGCATTGAACAACAACAAGCCACGAGTGCCGTACCGCGAAAGCAAATTGACCCGCATATTGCAAGACTCTTTAGGGGGAACTAGTCGTGCATTGATGGTCGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACCGTTAGTTTGGCTGCTAGATCAAGGCATGTGTCTAATTTTGTGCCTTCAGCTCATAAACAAGAGACTCCAAAAGTTAAAGTAGATATGGAAGCTAAATTGAAAGCTTGGCTAGAATCAAAAGGCAAAACAAAGAGCTCACAAAAACTTGCTGCATTTAACTCTCCAGTTCCAAGAAAAACTCCATGTTCGGTCACAATCTCTGCTAAGAGATGCGTTACTTTCAATGGTTCAGTGAAAGAAGGAAGAACTGGAATTAATGAAAACACAAAACAACAACATACAAATGAAAGATCCTTTGCTGTAGCTTTTGGAAATCTACTGGATAGTGAAGATCCTTCCGATACTTTCGTTGAGGACGAGGAGAATGGTAATTGTGGTGTTAAATGCAACAATAAGCAAGAACCTGAGCATCATACCAAGAAGTCTTCATGGGAGCCGGATAAAAATATCTCTGCTGAGCCATTGACCGAGACGATGAACTCTCCAATTAAAAATGAGATCAAAGATGCAGCACAAAGTCCTTTAAGAAAACCCCTCTCCCCACTCAACATCAGTGTTAATCAAAAGCCCCTTGAAGTGTTCTCACAAACACCTGTTATAGAAACCTGCTCCGCTAACAAAGGGATAATACAAAAGAACAACACTCCGCTTGGCAAATTCAGTACACGAAGTTCTGCATTAAAGAATTGTCTAGTTCAAGAATACATTGATTTCTTAAATAATGCAAGCAGAGAGGAACTTCTAGAGTTAAAGGGCATAGGAGAGAAGATGGCAGAATACATACTGGACCTCAGGAAAGAAAGTCCGCTTAAATCGTTAAGCGACTTAGAGAAGATAGGCCTCTCTTCCAAGCAGGCCCATAACTTGTTCACTAAAGCTGCAAAGAATCTATTTGAAGATAAAGCGACAGATTCAATACTCAGTTGA 1944 0.4331 MATKSCCTPKKPSSTNPVSVSKVRVIVRVRPFLPHEISSRNANPVPCVSVLDQHFESAQDEVAVYLKDPQTSRKECYQLDSFFGEEDNNVGQIFSREVSPMIPGIFKGCNATVFAYGATGSGKTYTMQGTNEHPGLMTLAMSMILSICQSSGRTASISYYEVYMDRCYDLLDVKEKEISVWDDKDGQIHLRGLSQVPIHTMSDFHDVFSSGVQRRKVAHTGLNDVSSRSHVVLVISVSTPSADGTGAAVFGKLNLIDLAGNEDNRRTCNEGIRLQESGKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKQETPKVKVDMEAKLKAWLESKGKTKSSQKLAAFNSPVPRKTPCSVTISAKRCVTFNGSVKEGRTGINENTKQQHTNERSFAVAFGNLLDSEDPSDTFVEDEENGNCGVKCNNKQEPEHHTKKSSWEPDKNISAEPLTETMNSPIKNEIKDAAQSPLRKPLSPLNISVNQKPLEVFSQTPVIETCSANKGIIQKNNTPLGKFSTRSSALKNCLVQEYIDFLNNASREELLELKGIGEKMAEYILDLRKESPLKSLSDLEKIGLSSKQAHNLFTKAAKNLFEDKATDSILS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181733g00002 647 SMART kinesin_4 20 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 MobiDBLite consensus disorder prediction 449 501 - -
Stsc181733g00002 647 Gene3D - 564 635 - -
Stsc181733g00002 647 FunFam Kinesin-like protein 19 389 - -
Stsc181733g00002 647 Pfam Kinesin motor domain 28 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 Gene3D Kinesin motor domain 19 391 IPR036961 -
Stsc181733g00002 647 SUPERFAMILY RuvA domain 2-like 572 619 IPR010994 -
Stsc181733g00002 647 CDD KISc_KID_like 23 347 - -
Stsc181733g00002 647 Pfam Helix-hairpin-helix motif 578 602 IPR000445 GO:0003677
Stsc181733g00002 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 376 IPR027417 -
Stsc181733g00002 647 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 21 401 IPR027640 GO:0003777|GO:0007018
Stsc181733g00002 647 MobiDBLite consensus disorder prediction 470 486 - -
Stsc181733g00002 647 ProSitePatterns Kinesin motor domain signature. 251 262 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc181733g00002 647 PRINTS Kinesin heavy chain signature 252 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 PRINTS Kinesin heavy chain signature 301 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 PRINTS Kinesin heavy chain signature 108 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 PRINTS Kinesin heavy chain signature 220 237 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 ProSiteProfiles Kinesin motor domain profile. 22 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc181733g00002 647 FunFam Kinesin-like protein KIN-10C 564 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181733g00002 Stsc-Chr181733 14301 18643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181733g00002 22 398 Calmodulin-binding Proteins AT5G65930 31.877 1.52e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181733g00002 K10403 - gmx:100804591 962.214