Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181732g00007 ATGGACCAGTACGAGAAGGTCGAGAAGATTGGGGAAGGAACCTACGGCGTCGTTTACAAGGCTCGCGATCGCGTCACCAACGAGACCATCGCTCTCAAGAAGATTCGCCTTGAGCAGGAGGACGAAGGCGTTCCTAGCACTGCCATTCGCGAGATTTCTCTCCTCAAGGAAATGCATCACCGGAACATTGTTAGGTATTCTTCTCTTCTGACTCCTAATCTCACTTGTTATCTCAAAAACTGTGTATAA 249 0.4859 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHRNIVRYSSLLTPNLTCYLKNCV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181732g00007 82 ProSiteProfiles Protein kinase domain profile. 4 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181732g00007 82 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Stsc181732g00007 82 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Stsc181732g00007 82 Pfam Protein kinase domain 4 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181732g00007 82 PANTHER CELL DIVISION PROTEIN KINASE 1 72 - -
Stsc181732g00007 82 FunFam Cell division related protein kinase 2 1 79 - -
Stsc181732g00007 82 SUPERFAMILY Protein kinase-like (PK-like) 1 73 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181732g00007 Stsc-Chr181732 28285 28800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181732g00007 1 78 Core Cell Cycle Gene Families AT3G48750 80.769 2.39e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Stsc181732g00007 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181732g00007 K02206 - ppp:112280217 128.642