Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181731g00004 ATGTGCATGACATTTGGCGAGTTTATTTTCAGGTCATTTCAGTTACAACATGTCTTCAATTTGGATAGTGAGAATCAGGCAAAGTATATGGCAACACTAATTGATCAAAAGGATAATGTCTTTATCATGTCCAATCCCAAGTCAAAGTATCCAGTGCTTCAACTAGACTGGAGGTTGATATCAGATCTTGTGGTTGTTATTGTTTCTGCAACCTGTGGTGGCATTGCATTTGCGAGCATTGGACAACCGGTAATGACTGGATATCTTTTAGCAGGATCATTGATTGGACCAGGAGGGTTGAGTTTTGTAAATGAAATGGTCCAAGTTGAGACTGTTGCTCAGTTTGGCGTAATATTTTTGCTTTTTGCATTGGGCTTGGAGTTTTCGGCAGCAAAGTTATCTGGTAGTAAATCTTCAGAGGGTATATTTGTTGGTGTATTTCTGTCTATGTCATCAACTGCAGTGGTATTGAAGTTCCTAATGGAAAGAAATAATGCCAAAGCCCTTTATGGTCAGGTCATAATTGGAACTCTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCACTGCTTCCAGTTCTGGATGGTACATCTGGTGTTTTTCAAGGAATAATGTCCATGACTAAATTGTTGGTGATTTTAATTTCATTTTTGGCTGTTTTGTCGATTTTTGCTCGTACTTGTGTTCCATGGTTCCTTAAACTTATAATGAGCTTATCATCTCAGACCAATGAACTTTATCAATTAGCAGCAGTGGCATTCTGCCTACTTGTTGCCTGGTGTCTATCTGACCAACTCGACAAAGTTCCCTACGTTGGGCGGTGCAGTGATAAGCTCGGTTTAAGCCTTGAACTTGGTTCCTTTGCTGCAGGAGTGATGGTATCAACAACAGATTTTGGCCAACGTACACTTGAACAAGTTGAACCTATTCGCAACCTTTTTGCTGCTTTGTTCTTGGCCAGCATTGGGATGCTTATACATGTACATTTCCTTTGGATTCATGTTCATATTTTACTGGCAGCTGTTATATTGGTGATCATCATAAAAACAACTGTAGCTGCAACTGTTGTCAAGGGGTTTGGGTACAATAACAAGACTTCACTCCTTGTTGGGATGTCTCTTGCTCAAATTGGGGAATTTGCCTTTGTGCTCCTTAGTCGTGCTTCAAATATTAATTTAGTTGAGGGAAAACTGTATTTGGAACAACAGCTCTCAGCCTGGTATGCATACACTGTGACTACACCATTGCTTTTCAAGCTAATTCCTGCTGTTGTGCATGTTGGTGCATCGTTGCATTGGTTCCCTCCTGACAATCCAACCAAGGCACTAAGGCAGGTATCAGAGAGTGGAAAGGTGGTTGACTAA 1368 0.4079 MCMTFGEFIFRSFQLQHVFNLDSENQAKYMATLIDQKDNVFIMSNPKSKYPVLQLDWRLISDLVVVIVSATCGGIAFASIGQPVMTGYLLAGSLIGPGGLSFVNEMVQVETVAQFGVIFLLFALGLEFSAAKLSGSKSSEGIFVGVFLSMSSTAVVLKFLMERNNAKALYGQVIIGTLILQDCAVGLLFALLPVLDGTSGVFQGIMSMTKLLVILISFLAVLSIFARTCVPWFLKLIMSLSSQTNELYQLAAVAFCLLVAWCLSDQLDKVPYVGRCSDKLGLSLELGSFAAGVMVSTTDFGQRTLEQVEPIRNLFAALFLASIGMLIHVHFLWIHVHILLAAVILVIIIKTTVAATVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNINLVEGKLYLEQQLSAWYAYTVTTPLLFKLIPAVVHVGASLHWFPPDNPTKALRQVSESGKVVD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181731g00004 455 Pfam Sodium/hydrogen exchanger family 64 133 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc181731g00004 455 Pfam Sodium/hydrogen exchanger family 136 399 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc181731g00004 455 Gene3D - 130 428 IPR038770 -
Stsc181731g00004 455 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 131 442 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181731g00004 Stsc-Chr181731 14160 18997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181731g00004 11 452 Antiporters AT5G11800 69.427 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181731g00004 K26735 - qsa:O6P43_003908 623.624