Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181719g00005 ATGGAGAATTCAAGAGGCAATAACGGCAATGGACATCAACAAATGATGAGCCTTGTTATCAATGGCGAGAGTCATACACAGGCTAATTTGGGTGAAGTAATTGCCCACTATTTGGCCTCATTACAACCCTGCAAACAACGCTTTCTGGGGTACCCGACGAATGAGGAATTCAATTACTCAGAGCTGGCTCCATTGCTTCATATTCATCTTAACAATGCAGGGGATCCGTTTCAGGGGAGCAGCTTCACTCTGAATTCAACATGTTTCGAAGTGAGTGTGCTTGATTGGTTTGCTAATTTGTGGCACATTCAAAAGCATGAATACTGGGGATATGTCACCTCTGGTGGTACTGAAGGCAATCTCCATGGACTCTTACTTGGGAGAGAACAATTTCCAGATGGGATTCTATATGCCTCAGAAGACTCCCATTATTCTGTATTTAAGATAGCAAGAATGTGCAGAATTCAGTGTATCAAGGTTAAGACTTTGATCTCTGGTGAGATTGATTGCAATCATCTCAAGGCTTTGTTACTTGCTAACAAACACAACCCTGCCATAATCAATCTTAACATAGGGACAACAATGAAAGGAGGTATTGACGACATTGATGTTGTAATAAAAACACTTGAGCAAAGTGGTTTCAGTCGTGATCGATTCTATATTCATTGTGATGCAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAGCCGCTGGCCCAAAGATAACATTCAAGAAACCCATTGGAAGCATAACAATTTCAGGACACAAGTTCTTGGGATGCCCAATTCCTTGTGGTGTTCTAATCACTCGTTTAAATTACATAAATGCCCTATCAAGAGACATAGGATACATTGCATCAAGAGATGTAACAATCACAGGCAGCCGCAGTGGCCATGCCCCAATCTTCCTCTGGTACAATCTGCAGAAAAAGGGGTTAATGGGGATCAAGAATGAAGTGGAGAATTGCATAAGCAATGCACGTTACTTGAAGGATAAGCTGGGAGATGGTGGGATTGGAGCAATGGTGAATGAGTTTAGTAACACGGTTGTGTTTGAGAAGCCTCATGATGATGAGTTTGTGAGTAGGTGGAGTTTGGCTTGCAATGGAAACATTGCACATGTTGTGGTCATGCAACATGTAACCATTCAAATGCTGGATTCTTTTGTTGAGGAATTTATTAACAGCAGATCCATGTGGTTACAACATGGAACCATAAAGCCTCTCTGCATTGCATATGAAGTTGGTGCTCTGAATTGTACTTGCCCATTGCATAAAGCTAAGGATAACCCAACACCTGCTCTTCAACTTGTCAAACAAATTGTGTAG 1329 0.4153 MENSRGNNGNGHQQMMSLVINGESHTQANLGEVIAHYLASLQPCKQRFLGYPTNEEFNYSELAPLLHIHLNNAGDPFQGSSFTLNSTCFEVSVLDWFANLWHIQKHEYWGYVTSGGTEGNLHGLLLGREQFPDGILYASEDSHYSVFKIARMCRIQCIKVKTLISGEIDCNHLKALLLANKHNPAIINLNIGTTMKGGIDDIDVVIKTLEQSGFSRDRFYIHCDAALFGIMLPFLKAAGPKITFKKPIGSITISGHKFLGCPIPCGVLITRLNYINALSRDIGYIASRDVTITGSRSGHAPIFLWYNLQKKGLMGIKNEVENCISNARYLKDKLGDGGIGAMVNEFSNTVVFEKPHDDEFVSRWSLACNGNIAHVVVMQHVTIQMLDSFVEEFINSRSMWLQHGTIKPLCIAYEVGALNCTCPLHKAKDNPTPALQLVKQIV 442
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc181719g00005 442 Gene3D Aspartate Aminotransferase, domain 1 309 397 IPR015422 GO:0003824
Stsc181719g00005 442 Gene3D - 67 308 IPR015421 GO:0003824
Stsc181719g00005 442 PANTHER - 23 426 - -
Stsc181719g00005 442 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 250 271 IPR021115 GO:0016831
Stsc181719g00005 442 SUPERFAMILY PLP-dependent transferases 37 394 IPR015424 -
Stsc181719g00005 442 Pfam Pyridoxal-dependent decarboxylase conserved domain 87 345 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc181719g00005 Stsc-Chr181719 29173 32266 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181719g00005 191 332 Calmodulin-binding Proteins AT1G65960 30.719 9.27e-09 55.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181719g00005 K25193 - gmx:100781665 602.823