Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181719g00004 ATGGCAACCAATAATAATAATAATTCAGCCCTTATTAATAATAACGAAACCAAGTTTGTAGTGAGTGACCTTGAGCAGCAACAACAATTAGAGAGCAATGAAGAAGAAGCAAACAAGAAGAAGAAGAAGAAGGAGTTTGATTACTCAAAAAGATCCCAGTGGCTGCGTGCAGCGGTCCTGGGAGCGAACGACGGGCTGGTGTCGACGGCGGCTCTGATGATGGGAGTAGGAGCAGTGAGGGAAGACATGAAGGCCATGGTGTTGTCGGGTTTCGCAGGCCTTGTGGCAGGTGCATGCAGCATGGCCATTGGCGAGTTTGTCTCTGTGTATTCCCAGTTAGACATAGAGATTGCTCAAATGAAGAGACAACAACAAGAAGAAGAGGAGGAGGAGAAAGAGGGTTTACCGAAGCCATTGCAAGCAGCGGCAGCATCAGGGTTTGCATTCTCGGTTGGTGCAATGGTTCCTCTTCTTGCGGCATGTTTCATAAGGGAGTATAAGGTGAGGTTAGGACTCATTTTGGGATCGGTTAGCTTAGCTTTGATTCTGTTTGGTTGGTTGGGTGCCACTCTTGGTAAGGCTCCTCTCTTCAGGTCTTGTGTTAGGGTCTTCCTTGGTGGTTGGTTAGCCATGGCTATAACTTTTGGCCTAACCAAGTTCATTGGCGAAACCGCCCTTTAG 681 0.4758 MATNNNNNSALINNNETKFVVSDLEQQQQLESNEEEANKKKKKKEFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVREDMKAMVLSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQMKRQQQEEEEEEKEGLPKPLQAAAASGFAFSVGAMVPLLAACFIREYKVRLGLILGSVSLALILFGWLGATLGKAPLFRSCVRVFLGGWLAMAITFGLTKFIGETAL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181719g00004 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 221 IPR008217 GO:0005384|GO:0030026
Stsc181719g00004 226 Pfam VIT family 55 131 IPR008217 GO:0005384|GO:0030026
Stsc181719g00004 226 Pfam VIT family 129 218 IPR008217 GO:0005384|GO:0030026
Stsc181719g00004 226 Coils Coil 110 135 - -
Stsc181719g00004 226 Coils Coil 24 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181719g00004 Stsc-Chr181719 24725 25405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181719g00004 30 226 Nodulin-like Gene Family AT3G43660 66.000 1.92e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181719g00004 K22736 - gmx:100814343 283.108