Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181719g00001 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATGCAAGGTGGGGCTTCGTTTGGTGGGTTTGATTTGCCCGGGTCGATCCGGGTTCATCAACAGGGACAGCATCCTCATACCATGCATCAACAACATCAAAATCTTCAGCGCCAAGGGTCCTCGGTTCATGAGGGTTTTCCACTTACAATGGGGAACTTACAGAACTGTGATCAAACCATTTCCCTGACAGACTTTGGTAAGGGAGAAAGAAGCAAAAACTCGGCAAGCGAGGAAGATGAGCCGAGCTTTAATGAAGACGGTAGTGATGTTCACCATGAAGCTGGTAGAGGGAAAAAGGGATCGCCTTGGCAACGGGTGAAGTGGACTGATAAGATGGTAAGGCTTCTCATAACAGCTGTTTCTTACATAGGAGAGGATGGAAGTTCGGACGGCAGCGGAGGAAGAAGGAGATTTGCCGTCCTACAGAAGAAAGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCCGAAAGGGGTTATCATGTTTCTCCACAGCAGTGCGAGGATAAGTTTAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTTGGAAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCCACACTGTTGGATGTAATAGATTATCTTTCCGAGAAGGAAAAGGATGATGTTCGGAAAATATTAAGCTCAAAACACCTGTTCTACGAAGAGATGTGTTCTTACCATAATGGTAATAGGCTGCATTTGCCCCATGATCCTGCCCTGCAGCGTTCGCTGCAGTTAGCACTTCGAAATAGGGACGATCATGATGATGATTTGAGAAAGTCTCATAATGATGATCATGAAGAAGATGATCAAGATGCGGAATTCGATGACCATGATGACTTTGAAGAGAATTATACTACCCATGGAGACAGTAGAAGAGCATATGGGTCTATGAAGAAATTGAAACAAGGGCACTGCCAAGAAGATTCTACTAGTTTTGGTAGCTCTTTAAATTGTCAGCACTACAGCAAAAGTTCCTATTCCCACGGACAGATGGTCCAATCCGATGTGAATCAAGGTTTACCTGAAAGCATGCGAACAGCTTGGTTTCAGAAGCAATGGTTTGAATCTCGCTCACTTCAGCTAGAAGAACAAAAGCTACAAATACAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTAAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGTGAGTTGGAGAAGCTGAGTTTGGAAAATGAAAGAATGAAGCTTGAAAACGAACGCCTCGCTTTAGAACTGAAACGGAAGGAAATTGGTGCTGGCTTTTAA 1317 0.4343 MEGNLSQGGLMQGGASFGGFDLPGSIRVHQQGQHPHTMHQQHQNLQRQGSSVHEGFPLTMGNLQNCDQTISLTDFGKGERSKNSASEEDEPSFNEDGSDVHHEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSDGSGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDDDLRKSHNDDHEEDDQDAEFDDHDDFEENYTTHGDSRRAYGSMKKLKQGHCQEDSTSFGSSLNCQHYSKSSYSHGQMVQSDVNQGLPESMRTAWFQKQWFESRSLQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERLALELKRKEIGAGF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 16 60 - -
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 266 281 - -
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 74 113 - -
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 266 308 - -
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 80 113 - -
Stsc181719g00001 438 Gene3D - 118 189 - -
Stsc181719g00001 438 Coils Coil 371 398 - -
Stsc181719g00001 438 Coils Coil 401 433 - -
Stsc181719g00001 438 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Stsc181719g00001 438 MobiDBLite consensus disorder prediction 30 60 - -
Stsc181719g00001 438 PANTHER F16F4.11 PROTEIN-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181719g00001 Stsc-Chr181719 7770 9086 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc181719g00001 Myb_DNA-bind_4 3.4e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181719g00001 - - gmx:100816474 709.138