Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181710g00003 ATGGCTGCAAAACTTTATGGTGGGGCTTACCTCTCTTTCTTTGTTGATGCTATTTTGGACAACCTGTCTAAAATACTTGAAGATGACTCTGTCCTCAATGGAAACTACTCTGCCATGGAGTTCCTTCAAAGGTTGGAGAACTGTCTGCTTGATGTTGCTCCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCACTGACAAGAGAGTCAAGAGGTGGCTTGCTGATCTCCAAGATGCTCTCTATTCTGCTGATGACTTGCTCGATGAACTTACCACTAAAGCTGCCACTGCCACTGCCACTCAAGCAGATCCAGGTATCTCTGCTTTATGTTCTCGTGTTGTTGATTCATATATTGAAGATAATGGTGACATGGAAAGAATAGTTGGAAGACTAGAGTCTGTTATAGCACGCAAAAAATTACTTCGTCTGAAGGAGACTGCTGCCAAGGTAGACATGTCATGGAGAATTCCATCCACATCTCTGGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAAGACGCCATACTGAAACAGTTGTTGGATGATGATGATGCTGGTGATGGTGATATACCTGTGATTCCCATTGTCGGCATGGGTGGGATAGGAAAGACCACTTTGGCTCAAATGGTTTACCACGACGACAAAGTGAAGGAGAAGTTTGATTTTCGAGGTTGGGTTTGTGTCTCTGAAGAGTTTGATCTTGTCAAGGCTACCAAGACTATAATCGAGGCAATAACTTCGAGCTCTTGTAACTTGACAGACTTGAATTTACTTCAACATGATTTGAAGGAAAAGCTGTCGAGGAAAAAGTTCTTTGTTGTGTTGGACGATGTCTGGAATGAAAATTATGATGATTGGAATATGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAAGTGGCTTCTGTGGTGGAAACTGTTTCACCTCATGAGCTAAGGTCGTTGTCCGATGAAGATTGTTGGTTGGTATTTTCAAAACATGCACGTCTTTCAACTGCTTCTATGGAGTATCCAACCCTGGTAAAAATCGGCAAAGATATCACAAAGAAATGCGATGGATTGCCGTTGGCAGCTCAAGCCCTTGGAGGTATATTGCGTGGAAATTCTGATGTCAAGTATTGGAATCATTTGCTGAAGAGTGAGATCTGGGGACTCTCCGATGATGGAATAAAGGGGATAAATGTTGTTCCAGCGTTGAGAATAAGCTATTATTTTCTGCCTTCACATCTGAAGCAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAGGATGAGTTGATATTGTTATGGATGGCGGAGAATTTTTTCCAACCAGTTGGAAAAAAGACTATGGAAGAAGTTGGTGATGAATATTTTGATGAATTACTTGCGAGATCATTTTTCCAACATCATAGTACTGAGGAAAATAAATTTGTGATGCATGATCTTGTGCATGATTTGGCAATGAGCTTTGCTGGAGAATTCTTTTATAGAGCTGAGGATCTTGAGAAGGGTTATGAGGTTGATAGTAAAACTCGTCATTTGTCACATAATGCCAAAGGCAATTATCCTATGTCAAAACTTTTGGGAGTTTGTGACCGAGTGAAACATATAAGGTCATTTCTTGAAATCAATCTGAATTGGTGGATGCCATTCAATATGGAAAATGCACCATGTTTCTTGTTGTCAAAGTTGCTGCACCTGAGAGCTTTGTCGTTCGAATCCTTTCCTCTTGAGTCATTGCCGGATTCAATAGGTGGGTTGATTCATTTGCGCTACTTGGATCTGTCTCATACCTACATCGTGACATTGCCAGAGTCATTGGGTGAGCTGTACAATTTGCAAACCTTGAAGCTGTTTCAATGCGACAAACTAGAAAAGCTTCCAGATGGTATGAAAGATCTTGTAAATTTACGCCATCTTGATATTAGAGGTACTAACTTGCATGAGATGCCGAAAGGCATGCACAAATTGAAAAAATTGCAGTTTTTGAGTGATTATGTTGTTGGGAAGCATGAAGAGAATAAGATTAAAGAATTGGGAGCACTTGCAAATCTACACAAATCAATTCACATTTCCAAATTGGAGAACATGGTCAATAGCAGCGAAGCTTTGGATGCAAGAATGTCTGATAAGGATGGCATTGATTCTATGATGTTGAGTTGGTCCTCGAATAAAGACGAGAATATAGTTGACCCCCAAATAGAAGAAGATATTCTGGACAAGTTACGACCTCACAATAATTTGAAAGAACTAAAAATCAGTGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTCTTCTTTCCACAACATCACCACACTAGGTCTGGGTAGTTGCAGGAATTTTAGTATGCTTCCTTCACTTGGACAGTTACCCTCTTTGAAGGATCTCACAATTTATAAATTTAAAAAGCTTGAGATTGTGGGTGCTGAGTTTTATCAGAACGGTGAATGTTGTTTGGAGACACCATTTCCAATGCTTGAAACTCTTAGGTTTGAGTCAATGCATTGCTGGAAGGAATGGTATTCATTGGAGGTCCATGCATTTCCTCGACTTAAGAATCTTACCATATGGGAGTGTCCCATGTTGAGAGGAGATCTTCCGAATCATCTACCATCTTTGCAATCACTTGAGATTGAGAATTGCGAGCAGCTCAGTTGTTGTGTTCCAAGAGCTCCAGCGATGACATCTTTAAGCATAAATGGTAGCAATGAATTGAGAATTGGGGAGCTACCTCCTTTATTGCGTCATCTATCAATTGGAGGAAAGCATCAAGTGGAGTCTGTGTTAGAGAGCATTACCAACATGCAACTGACTTGTCTCACGTATTTACGCATATCGAAATATCCATCCCACATATCGTTTCCGGTGAGTAGTATTCCCGCATCACTACAAGAGTTGCATATAAGTGATTGCAGAAAATTACAAGTCCAAATGGATGGGCAACATCACTCGCTGCAGACACTATATATAAATAACAGCTGTGATTCAGATACATCCTTCTCCTTGTTGGATTCCTTTCCTAATCTCGTGCGTGTTGACATCTTGAACTGTGAAAAGATGGAGTGTATTGTGGTGTCACGTTCTCTTTCATGTCTCCGTTTATTATGGATCGAGAATTGTGGGAGTTTGAAATCCATGTCGACGCTATGGAAGGCAGCACCTCAGCTACAACATCTCAGAATAAGGGGTTGCAAAGAGATGGATTTGTCTGCTAAAGGGGAGCCACAATGTAGCCTGAGATGTCTTGAAATCTCCTACAGTGAGAAACTGGCCCGCTCTGCACCATTCATGAATCCGCAATTTCATGGGCTTACTCATCTTCATATTTATGGTGGAGACGAGGAGAGTGTGAGGTGTCTCCCAAAGGAAGGTTGGTTGCCTGCCTCACTTGAGTCTCTCTCACTGAATCGCTTGAAAAGTGTGGAGACGCTGGAACGCAAGGGACTTGCACACCTCACCTCCCTCCAACAATTAACTATATATGATTGTCCAAAGTTGGAGAATATCGAGGGAGAAAAGCTGCCTGCCTCTCTAACACGACTCATCATCGAAGGAAACACTTTGCTGGGTGAACGGTGCCAGATGAAGGACCCACAAATTTGGCCCAAAATTTCCCACATCAGCAGCATTAAAGTTGATAGCAGATGGATTTGGTTATCCCACAAGTAA 3714 0.4136 MAAKLYGGAYLSFFVDAILDNLSKILEDDSVLNGNYSAMEFLQRLENCLLDVAPVLDDAELKQFTDKRVKRWLADLQDALYSADDLLDELTTKAATATATQADPGISALCSRVVDSYIEDNGDMERIVGRLESVIARKKLLRLKETAAKVDMSWRIPSTSLVEPSEICGRKEDKDAILKQLLDDDDAGDGDIPVIPIVGMGGIGKTTLAQMVYHDDKVKEKFDFRGWVCVSEEFDLVKATKTIIEAITSSSCNLTDLNLLQHDLKEKLSRKKFFVVLDDVWNENYDDWNMLLKPFQKGVKGSKILITTRSKKVASVVETVSPHELRSLSDEDCWLVFSKHARLSTASMEYPTLVKIGKDITKKCDGLPLAAQALGGILRGNSDVKYWNHLLKSEIWGLSDDGIKGINVVPALRISYYFLPSHLKQCFVYCSLYPKDYEFSKDELILLWMAENFFQPVGKKTMEEVGDEYFDELLARSFFQHHSTEENKFVMHDLVHDLAMSFAGEFFYRAEDLEKGYEVDSKTRHLSHNAKGNYPMSKLLGVCDRVKHIRSFLEINLNWWMPFNMENAPCFLLSKLLHLRALSFESFPLESLPDSIGGLIHLRYLDLSHTYIVTLPESLGELYNLQTLKLFQCDKLEKLPDGMKDLVNLRHLDIRGTNLHEMPKGMHKLKKLQFLSDYVVGKHEENKIKELGALANLHKSIHISKLENMVNSSEALDARMSDKDGIDSMMLSWSSNKDENIVDPQIEEDILDKLRPHNNLKELKISGYRGTTFPDWLGHSSFHNITTLGLGSCRNFSMLPSLGQLPSLKDLTIYKFKKLEIVGAEFYQNGECCLETPFPMLETLRFESMHCWKEWYSLEVHAFPRLKNLTIWECPMLRGDLPNHLPSLQSLEIENCEQLSCCVPRAPAMTSLSINGSNELRIGELPPLLRHLSIGGKHQVESVLESITNMQLTCLTYLRISKYPSHISFPVSSIPASLQELHISDCRKLQVQMDGQHHSLQTLYINNSCDSDTSFSLLDSFPNLVRVDILNCEKMECIVVSRSLSCLRLLWIENCGSLKSMSTLWKAAPQLQHLRIRGCKEMDLSAKGEPQCSLRCLEISYSEKLARSAPFMNPQFHGLTHLHIYGGDEESVRCLPKEGWLPASLESLSLNRLKSVETLERKGLAHLTSLQQLTIYDCPKLENIEGEKLPASLTRLIIEGNTLLGERCQMKDPQIWPKISHISSIKVDSRWIWLSHK 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181710g00003 1237 Gene3D - 415 501 IPR036388 -
Stsc181710g00003 1237 Pfam Rx N-terminal domain 14 97 IPR041118 -
Stsc181710g00003 1237 PRINTS Disease resistance protein signature 267 281 - -
Stsc181710g00003 1237 PRINTS Disease resistance protein signature 194 209 - -
Stsc181710g00003 1237 PRINTS Disease resistance protein signature 364 378 - -
Stsc181710g00003 1237 PRINTS Disease resistance protein signature 883 899 - -
Stsc181710g00003 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Stsc181710g00003 1237 FunFam Probable disease resistance protein At1g63360 416 501 - -
Stsc181710g00003 1237 Pfam NB-ARC domain 171 392 IPR002182 GO:0043531
Stsc181710g00003 1237 PANTHER DISEASE RESISTANCE PROTEIN RP 57 897 IPR044974 GO:0006952
Stsc181710g00003 1237 FunFam Probable disease resistance protein At1g61300 154 321 - -
Stsc181710g00003 1237 SUPERFAMILY L domain-like 490 912 - -
Stsc181710g00003 1237 Gene3D - 15 120 - -
Stsc181710g00003 1237 Gene3D Ribonuclease Inhibitor 554 913 IPR032675 -
Stsc181710g00003 1237 Gene3D - 151 321 IPR027417 -
Stsc181710g00003 1237 Gene3D Ribonuclease Inhibitor 914 1086 IPR032675 -
Stsc181710g00003 1237 Gene3D Ribonuclease Inhibitor 1087 1213 IPR032675 -
Stsc181710g00003 1237 SUPERFAMILY L domain-like 910 1219 - -
Stsc181710g00003 1237 Gene3D - 327 414 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181710g00003 Stsc-Chr181710 14630 19065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181710g00003 191 663 WRKY Transcription Factor Family AT5G45050 23.092 1.50e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181710g00003 - - aip:107626318 1741.09