Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181702g00006 ATGGCGTACCAGTCCCCCGATCACGAATCGGACTCCGAATCCAAGAAAGATGTCCGCCTCTACAACCCATACAAAGACCTCGAGGTTCCAATTAGAAATCTCTACCAGCTCCCAACCTCGCCGGAGTACCTCTTCGTCGAGGAGGCTCAACGCAAGCGTCGATCCTGGGGTGAAAACCTCACCTTCTACACTGGCTGCGGTTACCTCGGCGGCGCCATCTGTGGCGGCACTCGAGGCTTATTTGACGGCGTCAAATCCTTCGAGGCCGGCGACACGGTCAAGCTCCGGATCAACCGTATTCTGAACTCTTCTGGCCACGCTGGCCGTACTTGGGGGAACCGTCTCGGCGTGATAGGGTTGCTGTATTCCGGGATTGAGAGCGCGATGATGGAGACGAGAGACACCGACGATGTCTGGAACAGCGTGGTGGCGGGGCTCGGCACCGGAGCGCTGTATAGGATTTCGGGAGGCGTGAGATCTGCGGCGGTGGCAGGCGCTGTCGGAGTAGTGGTGGCCGGAACTGTCGTGACGGCTAAACAGGCTTTGAAACGCTACGCACATCTTGCGTGA 570 0.586 MAYQSPDHESDSESKKDVRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEAQRKRRSWGENLTFYTGCGYLGGAICGGTRGLFDGVKSFEAGDTVKLRINRILNSSGHAGRTWGNRLGVIGLLYSGIESAMMETRDTDDVWNSVVAGLGTGALYRISGGVRSAAVAGAVGVVVAGTVVTAKQALKRYAHLA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181702g00006 189 PANTHER TIM23 30 176 IPR045238 GO:0022857
Stsc181702g00006 189 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181702g00006 Stsc-Chr181702 30254 31248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181702g00006 4 184 Chloroplast and Mitochondria Gene Families AT1G17530 63.388 3.31e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181702g00006 K17794 - gmx:100813158 274.248