Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181698g00001 ATGAAAAGAAAAACAACAAAAAACATGGGCAGTTGCAGCATCTACTTTCCCCTTAATATCATTGCTGCATCGTTTCTTCTTCTGGCATTCTTGCCGGAAGCTGTTCATGGAAGCGCCACCAAAAAGTGCTACATTGTGTACTTGGGAGCGCATTCTCATGGTCCAACCCCTACCTCTCTTGACCTTGATGCTGCCACAAATTCTCACTACCATTTACTAGCTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAGGCAATTATATACTCGTATAATAAACACATAAATGGGTTTGCTGCCCTGCTTGAAGAGGAAGAAGCAGCACAAATTGCAAAAATACCAAATGTGGTGTCTGTATTCTTGACCAAAGAGCACAAATTGCACACAACCCGGTCGTGGGAGTTTCTTGGACTAAACCGAAATGATGGCAACTCGGCATGGAGAAAGGGACGCTTTGGTGAAAATACAATCATTGCTAACATTGACACAGGAATTTGGCCAGAATTGAGGAGCTTCAGTGACAGGGGGTATGGCCCCGTCCCTTCAAAATGGCGCGGGGGCAACGTTTGTCAAATACCCAATAACAACAATAACCGCCCTTGCAACAGAAAGTTAATAGGAGCAAGATTTTACAACAGCGCCTTCCAGATCTACAACGGCAAGCTAAACCCATTGCTACGCACGGCACGTGACTTTGTGGGCCATGGCACCCACACTTTATCAACAGCTGGCGGCAATTTTGTGTCAGGTGCGAACGTATTTGGAGTTGGGAATGGAACCGCCAAAGGTGGGTCCCCAAGAGCCAGGGTTGCATCCTACAAGGTTTGTTGGTCCCTAACTGACCCAGCCAGTTGCTATGGCGCCGATGTGCTGGCAGCAATAGACCAAGCCATAAGCGACGGTGTTGACATCATCTCACTCTCCGCTGGTGGCCAGTACTTAGTCCACCCCGAAGATATCTTCACCGATGAAGTCTCCATTGGTGCATTTCATGCAGTTTCTAGAAATATTCTGTTTGTTGCGTCTGCAGGGAATGATGGACCCACACCTGGAACCGTTGTGAATGTAGCTCCTTGGGTATTCACAGTTGCTGCTAGCACCATTGATAGGGACTTCACCAGTACCATCACTCTTTCTAACGGTCAACAAATCACGGGTGCGAGTCTTTTCGTAAACTTGCCACAAAACCAGGGATTTTCTGTGATTGATTCTACCGCTGGTAAATTTGCAAATGCTTCTGACCGAGATGCTCGACTGTGTAGGCCGGGAACACTCGACCCAGCCAAGATAACAGGGAAGATAGTGGCATGCTTTCGAGAAGGTAAAATAAAATCAGTTACAGAGGGTCAAGAAGCTAAGAATGCTGGTGCTAAGGGAATGTTCTTGCGCAATCAACAGCAAAATGGGAATACTCTTCTTGCTGAGCCTCATGTTTTGTCAACTGTTGGCGATCATAATTATCATCCAAAGGGGAAACCTGCTTTTATTACAACCGCCGCGGCCCTTGCAACGAGCTCTTCTGGTGAGACACTAAGGTTTTCGTCAGCAACAACAGTTAATGGAATAAAGCCAGCTCCAGTTATGGCTTCGTTCTCCTCAAGGGGACCCAATAAGATTCAACCATCAATACTCAAGCCGGATGTGACTGCACCTGGAGTGAACATTCTTGCTTCATATTCATTATTCGCAAGTGCATCTGACCTCTTATCTGACAACCGTCGCGGGTTTCGATTTAATGTGTTGCAAGGAACTTCTATGTCTTGTCCTCATGTAGCTGGTATAGCTGGGCTTCTCAAAACTCTGCATCCTACTTGGAGTCCAGCAGCCATCAAATCTGCAATCATGACTACTGCAACCACACGGGACAATACAAACAAGCCGATTCAAGATGCATTTAATAATAAGCTAGCGACTCCCTTTGATTATGGTTCAGGACATGTTCAACCTAATCTTGCAATAGAGCCTGGACTTGTTTATGATCTGCACCTTAATGATTATTTGAATTTCTTATGTGCTTCTGGATATAATCAACAAGCCATTTCAGCACTTAACTTCAACAGGACTTTCACTTGTAAAGGAAGTCACAGCATAAATGACTTAAACTACCCTTCAATCACATTGCCAAATCTTAAGTTGAGTCCGGTGATAGTTACTCGTACACTCACCAATGTTGGTCCCCCAGGCACGTATAATGCAACTGCCAGATTAGATGGATGCAGAATTACTATTGTGCCCAACTCCTTAACTTTCACAAAGATATATGAGAAGAAAACATTTAGAATTACTATACAAGCTTCAAGTGTGATAAAGCTTTATCAATATCAATTTGGAGAATTGTTGTGGACAGACGGAAAACACAGAGTTAGGAGTCCCATTACAGTCCAACGTCGAAGGTGA 2397 0.4464 MKRKTTKNMGSCSIYFPLNIIAASFLLLAFLPEAVHGSATKKCYIVYLGAHSHGPTPTSLDLDAATNSHYHLLASVLGSHEKAKEAIIYSYNKHINGFAALLEEEEAAQIAKIPNVVSVFLTKEHKLHTTRSWEFLGLNRNDGNSAWRKGRFGENTIIANIDTGIWPELRSFSDRGYGPVPSKWRGGNVCQIPNNNNNRPCNRKLIGARFYNSAFQIYNGKLNPLLRTARDFVGHGTHTLSTAGGNFVSGANVFGVGNGTAKGGSPRARVASYKVCWSLTDPASCYGADVLAAIDQAISDGVDIISLSAGGQYLVHPEDIFTDEVSIGAFHAVSRNILFVASAGNDGPTPGTVVNVAPWVFTVAASTIDRDFTSTITLSNGQQITGASLFVNLPQNQGFSVIDSTAGKFANASDRDARLCRPGTLDPAKITGKIVACFREGKIKSVTEGQEAKNAGAKGMFLRNQQQNGNTLLAEPHVLSTVGDHNYHPKGKPAFITTAAALATSSSGETLRFSSATTVNGIKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILASYSLFASASDLLSDNRRGFRFNVLQGTSMSCPHVAGIAGLLKTLHPTWSPAAIKSAIMTTATTRDNTNKPIQDAFNNKLATPFDYGSGHVQPNLAIEPGLVYDLHLNDYLNFLCASGYNQQAISALNFNRTFTCKGSHSINDLNYPSITLPNLKLSPVIVTRTLTNVGPPGTYNATARLDGCRITIVPNSLTFTKIYEKKTFRITIQASSVIKLYQYQFGELLWTDGKHRVRSPITVQRRR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181698g00001 798 CDD Peptidases_S8_3 125 619 IPR034197 -
Stsc181698g00001 798 Gene3D - 670 797 - -
Stsc181698g00001 798 Pfam Peptidase inhibitor I9 44 127 IPR010259 -
Stsc181698g00001 798 CDD PA_subtilisin_like 375 482 - -
Stsc181698g00001 798 ProSitePatterns Serine proteases, subtilase family, serine active site. 583 593 IPR023828 -
Stsc181698g00001 798 ProSiteProfiles Serine proteases, subtilase domain profile. 132 653 - -
Stsc181698g00001 798 Gene3D Peptidase S8/S53 domain 156 666 IPR036852 GO:0004252|GO:0006508
Stsc181698g00001 798 FunFam Subtilisin-like protease SBT1.5 155 386 - -
Stsc181698g00001 798 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 794 IPR045051 -
Stsc181698g00001 798 FunFam Subtilisin-like protease SBT5.3 33 128 - -
Stsc181698g00001 798 PRINTS Subtilisin serine protease family (S8) signature 582 598 IPR015500 -
Stsc181698g00001 798 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Stsc181698g00001 798 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Stsc181698g00001 798 Pfam Fibronectin type-III domain 699 794 IPR041469 -
Stsc181698g00001 798 SUPERFAMILY Subtilisin-like 127 657 IPR036852 GO:0004252|GO:0006508
Stsc181698g00001 798 Pfam Subtilase family 153 623 IPR000209 GO:0006508|GO:0008236
Stsc181698g00001 798 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 128 IPR037045 -
Stsc181698g00001 798 Gene3D - 369 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181698g00001 Stsc-Chr181698 1955 7270 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181698g00001 39 795 Subtilisin-like Serine Gene Family AT5G59810 52.756 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181698g00001 - - gmx:100813564 1145.95