Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181684g00010 ATGCACCTTCACTCCAAATGGGGAAACAGATGGTCAAGAATTGCAAGGAAGTTGCCTGGGCGTACAGACAATGAGATCAAGAACTTTTGGAGGACTCAAATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTCCAACCACCCAATCACCATCATCTTCCTCTACCAGTTACCAATCCTCTTCTAGTAATCATGTTGTGGATTCCAACAAGGATATTGGGGAAGAGAGCTTTTACGACACCGGAGGGCATAATGGTAATAACAACGACAACACCACGACGATGAAAGAAGGTTCCAATAATGATGATGATGATGGAATAATTATCAATAGTAATAATGATGTTGATGATTACTCCATGGATGATATATGGAATGATATAGCTGCTATGTCATCAGAAGAACACAACAACTTTCTTTCTGCTTCATCAACATCATGTTGGCATGATGACTACTATTATTCCTCATCAGAACCACTACCACCACTATGGATGATCATGGATGATCAACAACAAGAACAAGAACAAAGTGAAGTCTTATTCCTTTCTTCCTATGACCCAATCTTAACCACTTAA 576 0.4045 MHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPPTTQSPSSSSTSYQSSSSNHVVDSNKDIGEESFYDTGGHNGNNNDNTTTMKEGSNNDDDDGIIINSNNDVDDYSMDDIWNDIAAMSSEEHNNFLSASSTSCWHDDYYYSSSEPLPPLWMIMDDQQQEQEQSEVLFLSSYDPILTT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181684g00010 191 CDD SANT 2 32 IPR001005 -
Stsc181684g00010 191 ProSiteProfiles Myb-like domain profile. 1 34 IPR001005 -
Stsc181684g00010 191 MobiDBLite consensus disorder prediction 34 109 - -
Stsc181684g00010 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 38 IPR017930 -
Stsc181684g00010 191 SUPERFAMILY Homeodomain-like 2 38 IPR009057 -
Stsc181684g00010 191 Gene3D - 1 65 - -
Stsc181684g00010 191 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 111 IPR044676 GO:0003700|GO:0006355|GO:0043565
Stsc181684g00010 191 MobiDBLite consensus disorder prediction 82 97 - -
Stsc181684g00010 191 Pfam Myb-like DNA-binding domain 3 32 IPR001005 -
Stsc181684g00010 191 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181684g00010 Stsc-Chr181684 38263 40099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181684g00010 1 128 MYB Transcription Factor Family AT3G46130 49.242 9.33e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc181684g00010 Myb_DNA-binding 4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181684g00010 K09422 - gmx:100776886 124.405