Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181672g00002 ATGAAGAGTGTGAAGGAAAAGTTGAAGTCATCAAAATTAATAGTGAGCATGTTAATGGTGCAAGTATTTGCAACTGGTATGCAGCTTCTATCAAGAATCATATTGGTTAATGGCACCTTCATTTTCGCACTCACTGCTTATCGCCACATCGTTGCAGCTCTTTTTGTTGCCCCTTTTGCTCTTTACTTTGAGAGGGGCAGGGAAAAGAAGTTCACTTTCAAAGTTTGGTTTTGGATCTTCGTTAATGCTTTAGCTGGAATGACAATGGCTCTGGGATTGTTCTATTATGGTTTGAGGGACACTTCAGCTACTTACTCTATCAACTTTCTCAACTTGGTTCCTATTTGCACATTTGCTATCTCTATTATATGCAGAATGGAGAAAGTGAGAGTAAAAACGTGGGGTGGTAAAGCAAAGTGTGTGGGAGCAATATTGTGTGTTGGAGGTGCATTAGTTACAAGCCTTTACAAAGGGCATGAATTCTTCATTGGTAACCACAACCATGGCCACCATGATTCTCATCCTTCTCCTTTCTTGATTCACAAGACCAACATGCTTCGTGGAACTATCTTCTTGCTTCTTAGCTGCTTCTCATACACTGCTTGGTTCATTGCGCAAATACACTGGAATCTACAGCTTGTTACTATACTCTATTCGGGAGCACTTGCTACGGCTGCAACATTTTCTTTACTTTCATGGGCGATTTCAATAAAAGGACCAACATACCCTCCAATGTTTAATCCCCTTGCTCTTATTTTTGTGGCCATATCAGAAGCTCTCCTACTTGGTGAACCATTAAAAGCTGGAACGTTGCTGGGGATGGTTATGATAATATCAGGATTGTACTCATTCTTGTGGGGCAAAAAGAAGGAACCAAAAAGCTTGGCACAATCCAATGTGGTAGCAGCAGAAGTATCAACAAACATGGTTGCTGAGCCTGCAGGGCCACAAGCAACTGCTGTTGTAGTACCAAGTGCTTCTTCACCTAATAACAGTGTGGTTTTAGAGGTAGAAACCACTTGCAATAAGTAG 1032 0.4128 MKSVKEKLKSSKLIVSMLMVQVFATGMQLLSRIILVNGTFIFALTAYRHIVAALFVAPFALYFERGREKKFTFKVWFWIFVNALAGMTMALGLFYYGLRDTSATYSINFLNLVPICTFAISIICRMEKVRVKTWGGKAKCVGAILCVGGALVTSLYKGHEFFIGNHNHGHHDSHPSPFLIHKTNMLRGTIFLLLSCFSYTAWFIAQIHWNLQLVTILYSGALATAATFSLLSWAISIKGPTYPPMFNPLALIFVAISEALLLGEPLKAGTLLGMVMIISGLYSFLWGKKKEPKSLAQSNVVAAEVSTNMVAEPAGPQATAVVVPSASSPNNSVVLEVETTCNK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181672g00002 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 192 291 - -
Stsc181672g00002 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
Stsc181672g00002 343 PANTHER WAT1-RELATED PROTEIN 207 292 IPR030184 GO:0016020|GO:0022857
Stsc181672g00002 343 Pfam EamA-like transporter family 177 284 IPR000620 GO:0016020
Stsc181672g00002 343 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181672g00002 Stsc-Chr181672 9273 17872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181672g00002 15 289 Nodulin-like Gene Family AT1G09380 30.982 5.40e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181672g00002 - - gmx:100782551 421.009