Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181671g00007 ATGGCAATTGGTTCATCAATGGAGGGTCTTGTAGGCCTTCTTCTTGTTGTTATTGTAATGAGTTCAGCATCAGCATCTACATACAATGTTGGCGGCAGAACTGGTGGCTGGGTTGTGAATCCTAAAGAGAATTATACTCTCTGGTCTCAGCGTTACACCTTCCGAGTCAACGATTATCTCTATTTCAAGTACGAGAGAGGAAAAGATTCAGTTTTGATTGTGAGCAAACAAGATTACGAATCATGCAACACTGCGAAACCGTTACACAGGTTCAGAGGTGGAAGATCTGGATCTACAGTTCCGCTGAATAAGCCCGGTCCGTTCTATGTCATCAGCGGTAACCAACAAAACTGCCAGAAAGGACAGAAGTTCGCCGTTAACGTCGTCCCCGCCGCGATTCCTCCGTCACCGACGACACCGGCTCATTCTCCTGCGCCATCGACGACACCGGCTGCTCCGCCGCAGCATCGTTCTCCTGCTCCATCACCACCACCTAAGGTGACGCCTTCTCATCCCCCTTCCGGGGGATTGCCAGCTTCCCCTGCGGATTTAGGTCCGGTTAAGGCTCCGGCGCCGGCCCCGCATGGAAACGGTGCTTCTTCTAGGTCTTTTGGTGTGGGCTTTGGAGTAATTATTAGCATTGTGGTGGCGTTATTGTTCTAA 663 0.5068 MAIGSSMEGLVGLLLVVIVMSSASASTYNVGGRTGGWVVNPKENYTLWSQRYTFRVNDYLYFKYERGKDSVLIVSKQDYESCNTAKPLHRFRGGRSGSTVPLNKPGPFYVISGNQQNCQKGQKFAVNVVPAAIPPSPTTPAHSPAPSTTPAAPPQHRSPAPSPPPKVTPSHPPSGGLPASPADLGPVKAPAPAPHGNGASSRSFGVGFGVIISIVVALLF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181671g00007 220 PANTHER BLUE COPPER PROTEIN 25 150 IPR039391 GO:0009055
Stsc181671g00007 220 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Stsc181671g00007 220 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
Stsc181671g00007 220 MobiDBLite consensus disorder prediction 135 200 - -
Stsc181671g00007 220 FunFam Cupredoxin superfamily protein 25 133 - -
Stsc181671g00007 220 MobiDBLite consensus disorder prediction 135 176 - -
Stsc181671g00007 220 Gene3D - 24 133 IPR008972 -
Stsc181671g00007 220 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181671g00007 Stsc-Chr181671 42072 43098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181671g00007 7 180 Phytocyanin Superfamily AT5G53870 43.684 1.25e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181671g00007 - - adu:107462217 211.075