Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181668g00004 ATGATTTGGATACCAATATTTCTAGTCTCTCTTACTTGTCTCTGGCTATGGGGATTCACCAACAAGAACAAGAAACTACCTCCTGGTCCAAGAGGGTTACCAATTTTGGGTAGCCTTCATAAGTTGGGACAAAATCCTCATCTTGATCTTCACAAACTAGCACAAAAACATGGACCAATCATGCACCTGCGCCTAGGTTTGGTGCCAACCATTGTTGTCTCTTCTCCACAAGCTGCTGAACTCTTCCTTAAAACTCATGACCTTGTTTTTGCAAGTAGGCCACCCCATGAAGCTGCAAAGCACATTTCTTGGGAGCAAAGGAACATGAGTTTTGGTGAATATGGTCCTTATTGGCGCAACATGCGTAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATTAACTCATTCAGACAGATGAGGCAAGAGGAGGTTGAACTATTGATCAACGTTCTTAGAGATGCAGCAAATGATGGAGTTGCTGTTGATCTCAGTGCTAAGGTTTCAACACTGAGTGCTGACATGAGTTGTAGAATGGTGTTTGGGAAGAAGTACAATGACAAAGACTTGGATGAGAAGGGTTTCAAGACTGTCATACAAGAAGGGATGCATTTAGCGGCAACTCCGAATATAGGTGACTATATTCCTTATATTGGTAAACTTGATCTTCAAGGCTTAACTAGGCGCATGAAGGCTGTGGGAAAAACATTTGATGATTTTTTTGAGAAAGTTATTGATGATCACTTGCTATCATTAGACAACAGAGAAGATAAAGTTAAGGACTTTGTGGATGTCATGTTGGGATTTCTAGGCACTGAGGAATCTGAATACCGGATTGAACGCCCCAATATCAAAGCCATATTGCTGGATATGCTTGCAGGTTCAATGGATACATCAGCAACAGCAATAGAGTGGGCACTGTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAAACTTCAAATGGAGTTGGAATCTGTGGTTGGTATGAAGAGAATGGTAGAGGAGGCAGACTTGGACAAGTTGGAGTATTTGGACATGGTCATCAAAGAAACCATGAGGATCCATCCAGTGGCACCATTACTAATACCACACCAATCTATGGAAGATTGCATGGTTGGAGATTTCTTCATACCAAAGAAATCCAGAGTCATAATAAATGCATGGGCAATTATGAGGGACCCAAGTGTTTGGAGTGAGGCAGAGAAGTTCTGGCCGGAGAGATTTGAGGGAAGAGAGATTGATATTAAAGGTAGAGATTTCCAGTTTATACCCTTTGGATCTGGGAGAAGAGGATGCCCTGGATTGCAGTTAGGTGTAACAGTGGTTCGGTTAGTGGTGGCACAAGTTGTGCATTGCTTTGATTGGGAGTTACCAAATAAGATGTTGGCATCTGAATTGGACATGACTGAGGAGTTCGGTCTCACTATGCCTAGAGCCAATCATTTACTTGCCATCCCTACTTACAGGCTTCATAGTTCATAA 1488 0.4227 MIWIPIFLVSLTCLWLWGFTNKNKKLPPGPRGLPILGSLHKLGQNPHLDLHKLAQKHGPIMHLRLGLVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKHISWEQRNMSFGEYGPYWRNMRKMCTLELLSQTKINSFRQMRQEEVELLINVLRDAANDGVAVDLSAKVSTLSADMSCRMVFGKKYNDKDLDEKGFKTVIQEGMHLAATPNIGDYIPYIGKLDLQGLTRRMKAVGKTFDDFFEKVIDDHLLSLDNREDKVKDFVDVMLGFLGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWALSELIKHPRVMKKLQMELESVVGMKRMVEEADLDKLEYLDMVIKETMRIHPVAPLLIPHQSMEDCMVGDFFIPKKSRVIINAWAIMRDPSVWSEAEKFWPERFEGREIDIKGRDFQFIPFGSGRRGCPGLQLGVTVVRLVVAQVVHCFDWELPNKMLASELDMTEEFGLTMPRANHLLAIPTYRLHSS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181668g00004 495 Pfam Cytochrome P450 27 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PANTHER CYTOCHROME P450 93A3-LIKE 4 493 - -
Stsc181668g00004 495 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Stsc181668g00004 495 SUPERFAMILY Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181668g00004 495 CDD CYP71-like 56 484 - -
Stsc181668g00004 495 FunFam Cytochrome P450 83B1 15 487 - -
Stsc181668g00004 495 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181668g00004 Stsc-Chr181668 21956 23530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181668g00004 2 489 Cytochrome P450 AT3G26300 39.235 6.91e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181668g00004 K20562 - gmx:100809526 795.808