Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181662g00004 ATGTTAGATTTCCCATCAAGCTCTAATGTAATGATGTTTCAATGGAAAGGGTTCTTGCTTTTATTCAATACCTTTATTCTTTTGTGTTCTCAATCTTATTCTGCCAGCAGCAATTGTGTCCTTAACATTCAATATTCTTCAACTTTGAATAACTCAAACTGTGAACATCAAAGTTGGGGAGGATTCATCAGTAGCTGTTGTGAACCACTTTTTGATGATTACCTTTATGCCTTGGGGCTTCATGCCAACAAAACTGGAAAGCTATTCTTGAACTCCTCAGAGCAAGAAAACTGCTTCGTGTCGTGGGAGAATTTCAAGCTCTGCGGCGAGGTCAAGAAGTTGACAAGGGGAACCGGCGGTTGCTCTGATTACACTGTTATGGATGTCACCAACAAGCTTGGTGAAAATTTAAGGAGACTAGATGAAGATTGTATGAATGATAAGCCAAATGGAAACTGCAGTTCATGCTTGGAATCATGGGAAAATATAGTTGTAAGATCAGAGAGTTTCAGTGATGATGTTTGCAGGTTTGCTGTTCTAATCTCAATGACAAGCATCAAAGTTTATGATAGAGAATCAATCCAGAAAGTTTATAACTGCATAGGGGGGAACACCATTTCTGAAGATAAGCAAGAAGTAGAAGCAAGGGAGGGCAATGCTAAGCCAGGTTTCAAGATTCTAGGCTTTGCTTTAACTGGAGTCATAGTAGTAGCAGTACTTCTTGCAGCAGTTGCATTTTCTGTTAGAAGAAAAAGAGGTGCTAAAATCCCCACATTACTAGAAGATTATGAGGATTCAGCATCACTTAAAATAACTTTGAAGGATGTTTATGTAGCGACTAACAATCTCAGCGCCGCGAATTTCATTGGCCAAGGCGCAGCAGGGAAAGTGTATAAAGGTATACTCTCCAATGGTCTGCATGTTGCAGTGAAGCATATTACCAATGAAAGTTACATGGAAACATTTGTTAGAGAAGTGAAAAGCCTTTCCCATGTTAAACATCCGAACCTTGTTGCGCTGCTCGGATACTGCGAAAACAATGAATCTGAATGCTTCCTAGTCTATGAACTGTGCTACAATGGAAGCCTCTCACATTGGCTATTTGACTATGAAAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTTAAGTTTCTCCACACCTACCCAGGTGGCTGCATTGTTCACCGCGATATAAAGCCAGCAAACATTCTTCTAGATGGAGATTTCCAAGCAAAACTTTCAGACTTTGGTTTGTCCAAGGTTATGGATATTGGACAATCCTATGTAAGCTCAGAAGTAAGAGGAACATTTGGGTATATAGATCCTGAGTATAGGACAAATCACCATGTGAATGCCTCTGGAGATGTTTATAGCTTTGGCATAGTGTTGTTGCAGCTTCTATCAGGACAAAGGGTCCTTGACACCAATTTCCATAGACCAATGTCACTCAGTAAAATGGCCAAATATTCTGCTAGAGGCGGCGATATTTCGGGATTCGCAGACCCTAAACTCAAAGGAGAGTATTGTATAGAGGCATTTGGCATGGTAATGAAGCTAGCTTTGGCTTGCATAGGGCTCAAGGAACAAAGGCCCTCTATAGTGCAAGTGTTACATATTCTGGAAAAGGCACTTGATATCTCATCATCACAATAA 1677 0.4037 MLDFPSSSNVMMFQWKGFLLLFNTFILLCSQSYSASSNCVLNIQYSSTLNNSNCEHQSWGGFISSCCEPLFDDYLYALGLHANKTGKLFLNSSEQENCFVSWENFKLCGEVKKLTRGTGGCSDYTVMDVTNKLGENLRRLDEDCMNDKPNGNCSSCLESWENIVVRSESFSDDVCRFAVLISMTSIKVYDRESIQKVYNCIGGNTISEDKQEVEAREGNAKPGFKILGFALTGVIVVAVLLAAVAFSVRRKRGAKIPTLLEDYEDSASLKITLKDVYVATNNLSAANFIGQGAAGKVYKGILSNGLHVAVKHITNESYMETFVREVKSLSHVKHPNLVALLGYCENNESECFLVYELCYNGSLSHWLFDYEKVLSWIQRLEIAVDSARGLKFLHTYPGGCIVHRDIKPANILLDGDFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYIDPEYRTNHHVNASGDVYSFGIVLLQLLSGQRVLDTNFHRPMSLSKMAKYSARGGDISGFADPKLKGEYCIEAFGMVMKLALACIGLKEQRPSIVQVLHILEKALDISSSQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181662g00004 558 ProSiteProfiles Protein kinase domain profile. 283 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181662g00004 558 FunFam probable receptor-like protein kinase At5g59700 358 558 - -
Stsc181662g00004 558 SUPERFAMILY Protein kinase-like (PK-like) 267 549 IPR011009 -
Stsc181662g00004 558 Pfam Protein kinase domain 287 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181662g00004 558 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 158 549 - -
Stsc181662g00004 558 Gene3D Phosphorylase Kinase; domain 1 245 357 - -
Stsc181662g00004 558 FunFam Serine/threonine kinase protein 247 357 - -
Stsc181662g00004 558 Pfam SPARK 35 167 IPR043891 -
Stsc181662g00004 558 SMART serkin_6 283 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181662g00004 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Stsc181662g00004 558 Gene3D Transferase(Phosphotransferase) domain 1 359 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181662g00004 Stsc-Chr181662 12735 15225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181662g00004 225 549 Receptor kinase-like Gene Family AT1G70130 38.024 1.89e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Stsc181662g00004 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181662g00004 - - gsj:114395768 701.819