Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181644g00005 ATGCTGAATAGGTCTAGTAGAAGCCATAGATCTTCTTCAATCAATGGAGAGGTTTCAAATCAGATAGTTTCATATGGGAGAGGCCAGAGCTCAGTAAAAATGGATGATGTTTCGTTAGCCATAGCCTTTGCTTTCGAGAATGGCACGGCGAAACCAAGAAGAGCTGATTCATCTTACTATAGCAATAACAATAATAATTCAACTTTGGCTTTTCTTCACCAAATAAAGAAGGGAACAATGGAATTTGGCATGATGGATAGACAAGGAAACATGGTTAGGCAACAAGCTTCAACAAACAATTTTCAAGGCCTCTCCCCTATGCAGATAAATGAAATATCGAAAGGCGCACAGAGACTAAACCAGATACTAAGAGCTTGCTCCAATGGTTTCAACATTGATAGATATTCAATTGAAGTCGCGAAGGAGCTTTTCCAAGGAGCTATTGATTTGGAACAGTCCCTCAGGATGCTGGTAGAGCTGCAGCAGAATTCAGAGTTCTTGATTGCGCCGCATAAGAAAAACCGGATCAAGTTATTGGATGAAGACAGCGAAGATGATGATGATAGCAACAAAACAGTTAGAGCATCTGAGCAAAACCAATTGGCGCCACCAATTTTCTCCTTTGACAAGAGATCTAGGCATACCCTTATGCAGGGGAAAATCATTCTGACAAACTCTAAAGAAGGCAGAAACTCAAATATCAAAAAGCAAGATGGAAAGATTTCAAGAGTTTCTCAAAAGCAAACAAATAGATCTAGTTCTGAAACCAAGAACCTCAATGCTGTTTCAGAGCAGAAAAACCACTCTGCCTCGGCAAAATCTGACACGGAGAAAGCAAGGATTCCAAGTGTAGTTGCAAAACTGATGGGGCTAGATAACTTGCCGGAGAAGGCAGAGCCGAAAAACATGCCGCAGAAGGATTCAGGTAATGCACAGAAAATTAGAGGAAATCAAGGAATGCCAGTGCAGTATACTAGTTCAAAGGAAAGAACAAAGAAGGTTGAAGAGAATAACAACAAAGAAACAGAGAATTTGGTAGCTATGAAGAAACAAAGAGTGCTAGAAGCCTTTAACATGGCTGCAACAACTCATGATGAAGACCAATTTTTTGGTGGCAATAAGAATTCGTTCGGAGAAAAGGCCAGCCCCAAGGTACTTTCTCAGAATGGAAAATCACTATGGAGTGACCTGTATGGAATAAAAACAATGAATGGTTTCGAGAAGCCGAAGCATAATATCAGTGCTGCTAATATCACAGAACAGAAGAGCACAGTAAAGGGCAGAATCAATGGTGAACTAGTGAATGAAAGATCACAAGTTAAGCCCTCAATGCAGGAAGAGAAAGAGATCAATGTTAGTAATGTCCAAATGCTGAAGAGAAATGCATATAAACAGAACATGAACAATCAGAAGAAGCCTGAGAAGAATCTAGCAGATCAGAAGTCATACATGCTCTCAAAATATGGGCCTCAAGAAGGGAAAAATCACAGTGAACAGCGACTCCAGCCGAGGGAGAAACAAATGGCACAGGCCAGATTACAAGGAGGGAGTGAATTGAATTTGAGATGTTCAAAAAACCAGAATAGGCTCATTAGTTCTCATAAGAAGCAGAACTCTGCAGAGAATTTGGAAGCTATGAAGCTGGAAGGAACTTTAGGAAACCAGTATGATGATTTTTCCAAACACCAGAAGTCCAATGTCTCCAATGAGAAAGTGAAGGAAATTGTTTATCGGAAGCCAGGTGTCAAAATGATGGTGGATGAAAAGATTGTTCCTAAACTGGCCAATATGAAGGTGAAAAATACCAGAAAGCAAAAAGTTGACATGCCTAGGAAGATTGTTGAAGTGTCTAATGAAGGAAATGGAAGAAAGCTCATTGAGAAAGTGAAACAGCAAATTCATATTTTGCATGATGCTAGACAAGGAGCAATAGATAGATTCAATGGATTTAAAGATCCGAAGGGAGAAATGGTTGACATCATGAACTCTAATGAAACAGCAGCTGAGGCTGAATCTCCGGATCGGAGAAGCCAACCACATAAAGAAGCCGACCTGGCTCCAACACCATACAATTCTGATGGCAGAGAACTCCATAGCCTAAAGGGAACAGTTGCTTTAACTCCAAATCATTTGGATCATGCTGCTCCTGTGGTAACAAATGATGGATTCAAGAGTGGTGAACTTGCATTAAATACAAGAAATGGAACCCGTGAAGAAAGCATGAGTACTAATAATAACCACTTACCCCAAAAATATCAAAATATATCTGCAAAGAGAGCCCAAAAGCCACTAACAGAAAGTGAAATCCGCCTGAAGAGGATCTTGGTCGCAAACCGATCATTCATCAACACTTCAGAAGCTCTATTCAGGCTCAACATTCCTTTCAGCATTCTGCAAGATGGTAACACTGGCAGTCAGAACAGTGAAGGTGAATGCAAAGAACTCTTGTTAGACTGCGGATATGAAGTAATGAAGCGAAAGGGGATACTGTCAGAACTCAAAGCTTATCCATTCTCAAACATATCAACAGATACAATGAGCATAACATCCTTGGATGACTTGGTTAGGCTTCTGAACAAAGACATCGAGAAGCTAAGATTCTATGGAAGGAACAACAGAAATTTCAATGCGAATGTGGAGGACTACCTGCCGAAAATGCTTGAACTCGACATATTCAGTCGAGAGCAAGACATAGACTGTATGTGGGATTTTGGTTGGAAGAATGAAACATATGCATTAATTGAAAGATGTGATGTTGTAAAGGATATGGAAAAACATGTCCTGAATGTGCTTTTGGATGAAATCACCAGAGACCTTATGCTTCAAGGAGGACTCAAAATGGCAACCATATAA 2853 0.4017 MLNRSSRSHRSSSINGEVSNQIVSYGRGQSSVKMDDVSLAIAFAFENGTAKPRRADSSYYSNNNNNSTLAFLHQIKKGTMEFGMMDRQGNMVRQQASTNNFQGLSPMQINEISKGAQRLNQILRACSNGFNIDRYSIEVAKELFQGAIDLEQSLRMLVELQQNSEFLIAPHKKNRIKLLDEDSEDDDDSNKTVRASEQNQLAPPIFSFDKRSRHTLMQGKIILTNSKEGRNSNIKKQDGKISRVSQKQTNRSSSETKNLNAVSEQKNHSASAKSDTEKARIPSVVAKLMGLDNLPEKAEPKNMPQKDSGNAQKIRGNQGMPVQYTSSKERTKKVEENNNKETENLVAMKKQRVLEAFNMAATTHDEDQFFGGNKNSFGEKASPKVLSQNGKSLWSDLYGIKTMNGFEKPKHNISAANITEQKSTVKGRINGELVNERSQVKPSMQEEKEINVSNVQMLKRNAYKQNMNNQKKPEKNLADQKSYMLSKYGPQEGKNHSEQRLQPREKQMAQARLQGGSELNLRCSKNQNRLISSHKKQNSAENLEAMKLEGTLGNQYDDFSKHQKSNVSNEKVKEIVYRKPGVKMMVDEKIVPKLANMKVKNTRKQKVDMPRKIVEVSNEGNGRKLIEKVKQQIHILHDARQGAIDRFNGFKDPKGEMVDIMNSNETAAEAESPDRRSQPHKEADLAPTPYNSDGRELHSLKGTVALTPNHLDHAAPVVTNDGFKSGELALNTRNGTREESMSTNNNHLPQKYQNISAKRAQKPLTESEIRLKRILVANRSFINTSEALFRLNIPFSILQDGNTGSQNSEGECKELLLDCGYEVMKRKGILSELKAYPFSNISTDTMSITSLDDLVRLLNKDIEKLRFYGRNNRNFNANVEDYLPKMLELDIFSREQDIDCMWDFGWKNETYALIERCDVVKDMEKHVLNVLLDEITRDLMLQGGLKMATI 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181644g00005 950 Coils Coil 331 352 - -
Stsc181644g00005 950 PANTHER OS01G0228800 PROTEIN-RELATED 4 940 - -
Stsc181644g00005 950 MobiDBLite consensus disorder prediction 179 204 - -
Stsc181644g00005 950 MobiDBLite consensus disorder prediction 243 269 - -
Stsc181644g00005 950 MobiDBLite consensus disorder prediction 666 696 - -
Stsc181644g00005 950 Pfam DUF761-associated sequence motif 270 297 IPR032795 -
Stsc181644g00005 950 MobiDBLite consensus disorder prediction 294 317 - -
Stsc181644g00005 950 MobiDBLite consensus disorder prediction 224 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181644g00005 Stsc-Chr181644 42300 45615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181644g00005 709 941 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 37.872 1.02e-39 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181644g00005 - - aip:107644060 1638.24