Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181642g00003 ATGGAATTCCTTGTGGCATTAGCAAGTGGAGTTGTGACAAAACTTGGGGAATCAATAATATCACCAATTGCGAACCAAGTTGGATACATAATCCGCTACAAAAAGAATGTAAAAAACTTGGAGAGCGAGATGAAGGAATTGGAATGCAAGAAACGTGTAGTGCAAGGAACCGTTGATGCAGATAAAAGGAATTCACTTCAAATTGCATCCAATGTGGAAGATTGGCTCTCCAAGGTAGCAACAATGGAGAATGAATTACAAGGATTATTCTATGACCATGAAGAACAAGTGATGATGAAAAGCAAGTGTCACAGTTTGGTGTCACGTTATTCACTGAGCAAGAGAGCCAAGAAATTCAGCACAGATATCTTGAGGCTCAAGCAAGAGAATTTCGATGTGATATCTTACCCTGCACCCCCACCAAGGCTTGGATCATCAACCTTCTTGAATTCTGATAGTAAGATCTTCCAAACAAGAGAATCAATCATGTGTGAGGTTATTGATAAACTGAGAGATGAAGATGTGAAGAGGATCAGCATATGTGGAATGGGTGGTGTTGGAAAAACAACATTTGTTAAAGAAGTGATCAAGATTTTAGAGGCAGAAGAAGATAACAAGTGTTTTGATGAGGTTTCCATGGCAGTGGTGTCTCAAACTCCAGATTACAGGAAGATCCAAGGTCAAATTGCTGATTCTATTGGATTGAAGTTTGACAAGGAAACTGATCAAGGAAGATCTCTACAACTGCATGATCGGTTGAAGAACATCAATAGTGTTCTGATAGTGCTAGATGATGTTTGGACAGACCTTGATTTCGAATCTATTGGGATTCCTTCCACAAATTGCAAGATTCTATTCACTTCAAGAATCCAAGATGTGTGCATCAAGATGAGGTGTCAAAGCAACTTCACAATCTCTGTCTTGTCTCGCGACGAAGGCTGGGATCTTTTCCATGACAGTATTGAAGCTGATCTTCTAGAGAAACGTGACATCCAAGGCATAGCAAGAGAAATTGCGAATGAATGCGGGGGATTGCCGATCGCGATTGTAACCGTAGCGAAAGCACTGGCAAATAAGGAGAAGCATGCTTGGGAGGATGCATTGGAGCAGCTGAGGAATTCGCCGGTAAAGTCTTTTCTTGAGATGCAAGCTACTGTCTATTCGTGCATTGAGCTAAGTTACAACTTTCTTGGTGCTGAAGAAAAGTTGTTCCTTTTCCTCTGTTCCTTATTCCCAGAAGACTTTGACGTTCCTATAGAAGCCCTACTTAGGCATGGTGTGGGACTAGGAATGTTCAAAGGCATTGATGCTTTGTGGAAAGTTCGAAATCGGGTGCATACAGTTGTTGATAGACTAAAACAATGCTTCATGTTGTTAGATAGCAATGTGGAAGAGTGTGTCAAAATGCATGATGTTGTTCGCGATGCTATCGGTTCTATAGCAGCACAATGTCTTAAAGAAGAAACATGGCCTTATAACAGTTATAGCAGTGCAATCTCACTGATCTTTGAGGAGAAAACAGAGAATCTTGATGTTTCAAATTGTCAAAAACTCATGGTACTGAGTCTGCAAAATGTGTCCATTAATTCTATGCCTTCTGTGGTTGCAGCTTTGGACAACATTCACACTCTAAGATTAGAAGCTTGCAATGTTGGAGACATATCCATAATTGGCCAGAAACTCAAGAAATTGGAGATTCTAAGCTTTGCTAAATCAAATATCAAGGTATTGCCATTAGAAATTGGGGAACTAAACTTGCTAAGGCTATTGGATTTAACTGAATGCAATTCTCTTATTCAAGTTTCTGCTACTGTCTTGGCAAGCTTGTCTAGGCTTGAAGAACTCTATCTTAGAGCAAGAAACTTTCCTTCCAAGGAATTGAATCGTATCCTCTTCGAGTTGCAATGCTTATCTCATAAGCTAAAAGTTTTTGAGTTCGCATTTGCTATGGTCGATGAATCTCTTCCCAGAGACCTAATCTTCAAAAACGTAGTAAGATTTTGGGTCTATGTCGGAGATTCATCGACCATTTCCCGCGGCCTTGTTCGTCGGGGATACCTACACCCAAATGTGCTGACATTAAATAACACATATTACAATTATATCAAGAAGAGTGTGACTCTTCAACATTTTCTTAAAAGAGTTGAAATTCTCAGCTTAGATGATATCAAGAACTTGAAATGTGTCATATCAGATTTAGATGAAGAGGGGTTTCCACTTCTGAAAAATCTCAGCATTGAGTCCTGCAACAATTTAGAGTATGCTGCAGATTCATGTGACCACTGTTGTGTCTTTCCACAAGTTCAATCAATTTCTTTGAGGAATTTGGAGAATTTGAAAGCAATAACAAGTCATGTGGCCAATCACTTTGAGTTTGATGCATGCCAATGCTTTGGAAGACTGCAACTTCTTAAGGTAGAATATTGTAAGAGTTTGAAGACCATCTTCACTTCATTGTTTCCAAGGAGAACTAGTTTGGCAAAACTTCAATGCTTGCATGTGCTTGAAAGCCATGGAATCGAATGCGTTGTCTCAAGCAATACAATGAATGTTGATGACTCAATCTTTGAGTTTTCTAACTTAGTGGAATTGAAGCTCCAAGAACTCCCAAATTTGACTGCATTCATCAAGGTTCAAGAATCCAATAATTTTTCTGAAAATTCTACTTCAGAATCAGATTTGGGTGAACATAGAGTCAGTGGTTCGGCACTTTTCGAATCTAATTCATTGGAATTATTTCCGAAGTTAGAGAAAATTCTGTTACGTGCATGTTCATCACTAAACACAGTTTTTAACATGAAGCAATCACAATCAGAAGATGCAGTTTTTGCTCAACTGAAAGAGGTAGAGTTATCATGGCTCAGTAATCTCAACCACATTTGGGGTTCTGTTCCAAGCAACATTCAAGGCTTTCATAAATTGAAATCAGTCAAAGTTGCAAACTGTGATTCTTTGAAATACATATTTACTCCCAGCATTGTAAGAGCACTCACTCAACTTAAGAAATTGGTGATACAAAGTTGCATGTCCCTAGAGAATTTTGTTGGGAATGAACAAGGCCAAGATGGTGAAACCCTTGTGTTTGTTCAATTGGAATCTTTAACACTTAAGGATCTGCCACAGCTTCAGAATCTTAGTCCAAATAATTCTTACATGATATTGTGGCCAGCTATGAGATCTTTGTGCATTGATGGTTGCCCCTTGCTCAAGATATCTACTAATGTGTGTGTACAAGAGAATTCCAATGTCATATCCAATTCAACCACCACTACCCATGATGTTGGAACTTCTTCTGGTATAGAAGATTCTCCTAGTCTAAGGTTTCTTCAATGTTGTTTTGGAGGCACACGGGAATCTTTTGTTTCCAATTCAAAGGCAAAGGATTTGAAAATGGAGAAAAGTGTTGTTGATGCAAATAACAAAATCAATTTCTTCTTCAATGGGGAAATGGGAGGATCCCCTATGCCAATTTTGGAACATGTTATAGTAAAAGGATGGGATTCTCTAGATGTCTTATTTCACCATAAACAAAAACAAAGCCAAGATTCTAATACCATAGTTGTCAATTGTTTGGTGAAATTTATGACAAAGCAAGTACCATCAAGTTCTACATTCCATAACATCACACTCTTAAGTTTAGAAGCTTGTCACAAATTGAGATATCTATGCTCAAATTCCATAGCAAAGCTTCTTGTTAAGTTACAAGAAATTAAAGTATCAAATTGTAAAGTGGTTGAGCAATTATTCCAATGTGAAGAGCAAGAGAAGATATGTGACTTAGAATGGCCATCATTGAAGAGAATTAGCATCATCAATTGCAGCATGATACAACTAATTTTGACTAGTAAAGTGGAAGAAGGGAAAACAAATATTATCAAACTACAGTCTCTTACACTGAGCCATTTACCAAATATTAAAAGCTTTTGCAGTACATGTTGTGCATTGGAACCTCCATTTTTGGAGAATGGCCATGGGAATGATGAGAGAGCAAGTAGTGAGGAAGAAAGAAACACAAGGCTTGCTCCACTAATAAATGGGTTCCAATTTCCAAACCTAAAACACATAGCAATAATGGGATGCAACAAAATGAGGTGTCTATTCTCTCCTTCAACTTCAAAAAGCCTTGTGAATTTGATGGATCTAGAGATATGTGCCTGTGGAGACATAGAAGAAATAGTAGTATCTTTGGAAGAAGACACTACTAAAGTGAATAAGATTGTGTTTCACCACTTGCAACATCTAAAACTTGAAAATCTACCAAAGCTCAAGGCCTTTTGCAAGGGTTCCTATGACTTTGATTTTCCACTATTACATGAAGTGTTCTTAAAAAATTGCCACATGATGGAGATATTTTCATCTGGGTCTTCATACACTCCAAAGTTGGATAAAGTAACCATGGAAATTGGAAATGTTTCCAAGAACATATGGATGGGAGATCTAAATGCTACTATGCCACTATGTAAAGGAATGTTGAAATTTCAAACATCAAAAACACTTAGATGGATCAAGCAAGATACATGGGCACTAAGATACTTGACCAAAGAAAAGGAGATCACAATTGAAGGCTTTCAAAGCCTTCTAAATCTTGTTCCCTCCAATGTGATTCACCTCTTTCAAAACCTAAATCAACTCACAATTAAAGATTGTGATTCCTTAGTAGAAGTGTTTGAATCAGAAGGAGTAACAACAACAATGAACAAAAAAGAAGAGCAAACCATCACAAACTATGAGTTACAATCAATGAGTTTGCAAAATCTTCCAAAGTTGACCCACATATGGAAAATTCATGGGGATGTTTTGGGATTCAAGAATCTAAGAATACTCAAAGTTGAGAACTGTGGCAATTTGTGTAGCTTGTTCTCTCCATCCATAGCCAAAAGCTTAGTGCAACTTTGGCACCTAAGAGTGTATAATTGCCACATGATGGAGGAGATAATTGAAGAATCATATGATGAGGAAAAGATTATTATTGAATTTCCATTGTTGAATAAGTTGGAGCTTCGTCACCTTCCGAAACTCGAATGTTTTTGTTCCGGAAGAAATTTGGATATTGAGCTTCCTTCTTGTGAAGAAATGGTGATTGAAAAATGTCCAAATATGACAAGCTTTTGCTATGGAGATGTTAATACACCAAAGCTTCTTCGGATATATAAAGGTTCATATGAGTATGTAGATTTGATTGTCAACCTTAATGTCACCATCCATTATGCTAATAAGAACTCCAAGGTTTCACAACAAACCTTAGAGAGAAGCAGATTCATAGAGCAAGATCATCATCATCTCCTCCTTGATTACTTAAGAAGTGAAACAGAGCTGTTTGTTGAAGATAGTGAAAACATGTTGCATTGTGTTCCATTGAATATGTTTCATAGGTTCCAACACATAAAACAACTGAAGGTAAGAGAATGTGGTTCAATTGTTGAGATCTTTGAATCAAAAGGATTAAATGCACATGGTGATGAAGGTTGTTACACCAAAACACTATACAATTACAACATGCAAGAGCTACACCTTTATGATCTTCCCAAGTTGATGCACATATGGAGAGAAAGCCATGGAGGACTCTTAACCTTTCGGAATCTTAGAAAGCTAAAGATCGGATGTTGTGACGGTTTGAAAAGCGTGCTTTCTCCTTCGATAGCCAGAGGCCTTCGACAACTCCAAGAGCTTTCAGTACATGAATGTGAGGAGTTGGAGAAAATAATCAGTGATGAAGAGGAGAAAATCTATGAGGAATCAATCAACAATGTGAAGATCATTGCATTCCCATCATTGAAATGGTTAACTCTTTATCGCCTTCCCAGACTTGAATGCTTTTGTTCAAGTGCTTATCATTTTGACTTGCCGTCCTGCCATGACATAATTATCAAAGAATGCCCCAAAGTTGAAGCTTGTTGCAAAGGAATGACCAAAACTTTCCAAAACTGA 5928 0.3769 MEFLVALASGVVTKLGESIISPIANQVGYIIRYKKNVKNLESEMKELECKKRVVQGTVDADKRNSLQIASNVEDWLSKVATMENELQGLFYDHEEQVMMKSKCHSLVSRYSLSKRAKKFSTDILRLKQENFDVISYPAPPPRLGSSTFLNSDSKIFQTRESIMCEVIDKLRDEDVKRISICGMGGVGKTTFVKEVIKILEAEEDNKCFDEVSMAVVSQTPDYRKIQGQIADSIGLKFDKETDQGRSLQLHDRLKNINSVLIVLDDVWTDLDFESIGIPSTNCKILFTSRIQDVCIKMRCQSNFTISVLSRDEGWDLFHDSIEADLLEKRDIQGIAREIANECGGLPIAIVTVAKALANKEKHAWEDALEQLRNSPVKSFLEMQATVYSCIELSYNFLGAEEKLFLFLCSLFPEDFDVPIEALLRHGVGLGMFKGIDALWKVRNRVHTVVDRLKQCFMLLDSNVEECVKMHDVVRDAIGSIAAQCLKEETWPYNSYSSAISLIFEEKTENLDVSNCQKLMVLSLQNVSINSMPSVVAALDNIHTLRLEACNVGDISIIGQKLKKLEILSFAKSNIKVLPLEIGELNLLRLLDLTECNSLIQVSATVLASLSRLEELYLRARNFPSKELNRILFELQCLSHKLKVFEFAFAMVDESLPRDLIFKNVVRFWVYVGDSSTISRGLVRRGYLHPNVLTLNNTYYNYIKKSVTLQHFLKRVEILSLDDIKNLKCVISDLDEEGFPLLKNLSIESCNNLEYAADSCDHCCVFPQVQSISLRNLENLKAITSHVANHFEFDACQCFGRLQLLKVEYCKSLKTIFTSLFPRRTSLAKLQCLHVLESHGIECVVSSNTMNVDDSIFEFSNLVELKLQELPNLTAFIKVQESNNFSENSTSESDLGEHRVSGSALFESNSLELFPKLEKILLRACSSLNTVFNMKQSQSEDAVFAQLKEVELSWLSNLNHIWGSVPSNIQGFHKLKSVKVANCDSLKYIFTPSIVRALTQLKKLVIQSCMSLENFVGNEQGQDGETLVFVQLESLTLKDLPQLQNLSPNNSYMILWPAMRSLCIDGCPLLKISTNVCVQENSNVISNSTTTTHDVGTSSGIEDSPSLRFLQCCFGGTRESFVSNSKAKDLKMEKSVVDANNKINFFFNGEMGGSPMPILEHVIVKGWDSLDVLFHHKQKQSQDSNTIVVNCLVKFMTKQVPSSSTFHNITLLSLEACHKLRYLCSNSIAKLLVKLQEIKVSNCKVVEQLFQCEEQEKICDLEWPSLKRISIINCSMIQLILTSKVEEGKTNIIKLQSLTLSHLPNIKSFCSTCCALEPPFLENGHGNDERASSEEERNTRLAPLINGFQFPNLKHIAIMGCNKMRCLFSPSTSKSLVNLMDLEICACGDIEEIVVSLEEDTTKVNKIVFHHLQHLKLENLPKLKAFCKGSYDFDFPLLHEVFLKNCHMMEIFSSGSSYTPKLDKVTMEIGNVSKNIWMGDLNATMPLCKGMLKFQTSKTLRWIKQDTWALRYLTKEKEITIEGFQSLLNLVPSNVIHLFQNLNQLTIKDCDSLVEVFESEGVTTTMNKKEEQTITNYELQSMSLQNLPKLTHIWKIHGDVLGFKNLRILKVENCGNLCSLFSPSIAKSLVQLWHLRVYNCHMMEEIIEESYDEEKIIIEFPLLNKLELRHLPKLECFCSGRNLDIELPSCEEMVIEKCPNMTSFCYGDVNTPKLLRIYKGSYEYVDLIVNLNVTIHYANKNSKVSQQTLERSRFIEQDHHHLLLDYLRSETELFVEDSENMLHCVPLNMFHRFQHIKQLKVRECGSIVEIFESKGLNAHGDEGCYTKTLYNYNMQELHLYDLPKLMHIWRESHGGLLTFRNLRKLKIGCCDGLKSVLSPSIARGLRQLQELSVHECEELEKIISDEEEKIYEESINNVKIIAFPSLKWLTLYRLPRLECFCSSAYHFDLPSCHDIIIKECPKVEACCKGMTKTFQN 1975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181642g00003 1975 Gene3D Ribonuclease Inhibitor 1509 1715 IPR032675 -
Stsc181642g00003 1975 Gene3D Ribonuclease Inhibitor 848 1092 IPR032675 -
Stsc181642g00003 1975 Gene3D Ribonuclease Inhibitor 1762 1974 IPR032675 -
Stsc181642g00003 1975 Gene3D Ribonuclease Inhibitor 1335 1473 IPR032675 -
Stsc181642g00003 1975 Gene3D Ribonuclease Inhibitor 483 791 IPR032675 -
Stsc181642g00003 1975 Coils Coil 354 374 - -
Stsc181642g00003 1975 Gene3D - 145 305 IPR027417 -
Stsc181642g00003 1975 SUPERFAMILY RNI-like 1348 1706 - -
Stsc181642g00003 1975 Gene3D - 307 391 IPR042197 -
Stsc181642g00003 1975 Coils Coil 30 57 - -
Stsc181642g00003 1975 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1766 1963 - -
Stsc181642g00003 1975 SUPERFAMILY L domain-like 468 828 - -
Stsc181642g00003 1975 SUPERFAMILY L domain-like 1564 1965 - -
Stsc181642g00003 1975 PRINTS Disease resistance protein signature 253 267 - -
Stsc181642g00003 1975 PRINTS Disease resistance protein signature 342 356 - -
Stsc181642g00003 1975 PRINTS Disease resistance protein signature 177 192 - -
Stsc181642g00003 1975 PRINTS Disease resistance protein signature 582 598 - -
Stsc181642g00003 1975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 408 IPR027417 -
Stsc181642g00003 1975 Pfam NB-ARC domain 160 395 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181642g00003 Stsc-Chr181642 22318 30410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181642g00003 174 509 WRKY Transcription Factor Family AT5G45050 26.361 9.50e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181642g00003 - - adu:110276728 2978.35