Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00007 ATGGCATCAATCATAGCATCTTATGTAGTTACTCCAAAAGAAGAAACTCCAAAGGGTCTTCTCTGCTTATCAGAGAGTGACCAAATGTGGCGTTGGAGTCATGCAACCACAATCTATGTTTACAATAACAACAACAATGTGAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCACATTCTGGTTCACTACTATCCATTATGTGGACGGTTGAGTTGGACAGAAGGTGGCCGTTTGCAAATGGATTGTAACACAAAGGGAGCCATCCTGCTTCAAGCTGAATCCACCAAAACAATGGATGAATATGGAGACTTCTCACCAAATGATGATTCCATCAAAGAACTCATGCCAAACCTTGATTACTCTCAACCCATAGAAGACATTCCTCTGTTGCTTGCACAAGTCACAAAGTTCCATGGTGGTGATGCCATTGCCATAGGAACTGCCATATCTCATACAATGAGTGATGGGGTTTCAGCAGTTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCACATGAATTGCCATTTCTCGATAGAACTGTGTTGACAGCCTCTCGGCTGCCGGCGTTGCGGTTTTTCGACCACCCGGAATTTAAGCCTCCACCACTCGTCCTTGGAAGAACAGATAACATTGAAGAACAAAAGAAGAAGACACGGGCTGCAATGTTTAAGCTAACTGCAGAACAGGTGCAGAAATTGAAGCAAAAGGCAAATATTGGTGATTATGAATCCAAGGAGAGACCTGTAAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCATGACAAAAATCAACCAACCTTAGCCAAGACAGTCGTTGATATTCGCAACAAGGTGAATCCTCCTCTACCAAAAAACTATTTTGGAAATGCTTTGGCTAACACTGTGACATCAACATGCTGCGTTGGAGATATCATATCAGAGTCACTGAGTTATGCTGCAAAAAGAATAAGAGAAGCAGTGGAAAGGATTTCAAATGATGAGTACATAAGATCACATCTGGAGTTTGTAGCGCGACAAGAACGAGTGGATTTGATTAGGACTCAGTTCTTGGAAAAAGGAGAGTATAGAGCAAATGTGTCCTTCTATGGGAACCCTAACATTACGCTTGGAAGTTGGACGCGTATGCCGGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTCTGGTCCAACCTATGTGTCTCCTTTCGATATTGGAATTGTGGCTCCAAGCTCTGAAGGGGATGGCTCCGTTGTTGTGTTACTGTGTTTTCAGATACAACACATGCAGAATTTCATCAAGCACTTTTGGGATATATAA 1368 0.4298 MASIIASYVVTPKEETPKGLLCLSESDQMWRWSHATTIYVYNNNNNVNVNVNELVQRMRDSLSHILVHYYPLCGRLSWTEGGRLQMDCNTKGAILLQAESTKTMDEYGDFSPNDDSIKELMPNLDYSQPIEDIPLLLAQVTKFHGGDAIAIGTAISHTMSDGVSAVHFINSWAKLTRGDALGPHELPFLDRTVLTASRLPALRFFDHPEFKPPPLVLGRTDNIEEQKKKTRAAMFKLTAEQVQKLKQKANIGDYESKERPVSRFEAIGAHIWRCACMAREHDKNQPTLAKTVVDIRNKVNPPLPKNYFGNALANTVTSTCCVGDIISESLSYAAKRIREAVERISNDEYIRSHLEFVARQERVDLIRTQFLEKGEYRANVSFYGNPNITLGSWTRMPVYEADFGWGKPDYSGPTYVSPFDIGIVAPSSEGDGSVVVLLCFQIQHMQNFIKHFWDI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00007 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 445 - -
Stsc181632g00007 455 Pfam Transferase family 4 452 - -
Stsc181632g00007 455 Gene3D - 2 212 IPR023213 -
Stsc181632g00007 455 SUPERFAMILY CoA-dependent acyltransferases 28 190 - -
Stsc181632g00007 455 Gene3D - 218 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00007 Stsc-Chr181632 41815 43685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00007 7 455 Monolignol Biosynthesis Gene Families AT5G48930 34.222 2.12e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00007 K13065 - gmx:100779814 491.886