Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00006 ATGGCATCAATCATAGCATCTTATGTAGTTACTCCAAAAGAAGAAACTCCAAAGGGTCTTCTCTGCTTATCAGAGAGTGACCAAATGTGGCGTTGGAGTCATGCAACCACAATCTATGTTTACAATAACAACAACAATGTGAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCACATTCTGGTTCACTACTATCCATTATGTGGACGGTTGAGTTGGACAGAAGGTGGCCGTTTGAAAATGGATTGTAACGCAAAGGGAGCCATCCTGCTTCAAGCTGAATCCAAGAAAACAATTGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAATCTTGATTACTCTCAACCCATAGAGGACATTCCTTTGTTGCTTGCACAGGTCACAAAGTTCCATGGTGGCAATGCCATTGCCATTGGAATTGCCTTGTCTCATCCCATGAGTGATGGGGTTTCAGCCATTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGAAGCATTGCACCCAAATGAATTGCCATTTCTTGACCGAACGGTTTTCACAGCCTCTAGCCTGCCATCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACTCATCCTGGGAAGAATAGACAACATTGAAGAACAAAAGAGGAAGACAAGGTTTGCGTTGCTGAAGCTCACAGCAGAACAGGTGCAGGAACTAAAGAAGAATGCAAATACTAATTATGCTGAATCCCAGCAGAAATATTACAGCAGATTTGAAGCTATTGCAGCGCATATATGGAGATGTGCTTGTATGGCCCGAGAGCTTGACAAAAATCAACCAACCTTAGTGAAGACGATAGTTGATATTCGCAATAAGGTGAATCCTCCTCTACCCAAAACTTATTTTGGGAATGCTTTGGCTTCCACCGTGACACCAACATGTTGCGTTGGAGAAATCATATCAGAGCCGCTGAGTTATGCTGCAAAAAGGATAAGGGAAGCAGTGGAAAGGGCTTCCAATGAAGAGTACATAAGATCACAACTGGAGTTTGTAGCACGACAAGAACGAGTGGATTTGATTAGGACTCAGTTCTTGGAAAAAGGAGAGTACAGAGCAAGATGTGACCTTCTTTGGAAACCCCAACATTATGCTTGGAAGTTGGTTGCAGATGCCAATGTATGA 1200 0.4342 MASIIASYVVTPKEETPKGLLCLSESDQMWRWSHATTIYVYNNNNNVNVNVNELVQRMRDSLSHILVHYYPLCGRLSWTEGGRLKMDCNAKGAILLQAESKKTIAEYGDFSPNDDAIKELIPNLDYSQPIEDIPLLLAQVTKFHGGNAIAIGIALSHPMSDGVSAIHFINSWAKLTRGEALHPNELPFLDRTVFTASSLPSLRRFDHPEFKPPPLILGRIDNIEEQKRKTRFALLKLTAEQVQELKKNANTNYAESQQKYYSRFEAIAAHIWRCACMARELDKNQPTLVKTIVDIRNKVNPPLPKTYFGNALASTVTPTCCVGEIISEPLSYAAKRIREAVERASNEEYIRSQLEFVARQERVDLIRTQFLEKGEYRARCDLLWKPQHYAWKLVADANV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00006 399 Pfam Transferase family 4 372 - -
Stsc181632g00006 399 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 361 - -
Stsc181632g00006 399 Gene3D - 219 379 IPR023213 -
Stsc181632g00006 399 Gene3D - 2 212 IPR023213 -
Stsc181632g00006 399 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00006 Stsc-Chr181632 30206 43685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00006 7 380 Monolignol Biosynthesis Gene Families AT5G48930 33.155 7.08e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00006 K13065 - gmx:100779814 415.231