Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00005 ATGGCATCAATCATAGCATCTTATGTAGTCACTCCAAAAGAAGAAACCCCAAAGGGTGATTTCTGCTTAACAGAGAGTGACCAAACAAAACGTTGGAGTCATGCTACCACAATCTATGTTTACAATAACAACAACAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCACATTCTGGTTCACTACTATCCCTTAAGTGGACGGTTGAGTTGGACAGAAGGTGGCCGTTTGAAAATGGATTGTAACGCAAAGGGAGCCTTGCTGCTTCAAGCTGAATCCAAGAAAACAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAGCTCATGCCAAACATTGATTACTCTCAACCCATGGAGGATATTCCTCTATTTCTGGCACAAGTCACAAAGTTCCATGGTGATGGCAATGCCATTGCTATATCAACTGCCATATCTCATACAATGAGTGATGGGGTTTCAGCCGTTCACTTCATCAACTTATGGGCCAAACTCACAAGGGGAGAAACATTGGACCCAAATGAATTGCCATTTCTCGACAGAAATGTGTTGACAGCCGCTGGGCTGCCGGCGTCGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCTACCACTCATCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAAGGTTTACATTGTTGAAGCTAACAGCAGAACAGGTGCAGAAACTGAAGCAAAAGGCAAATATTGGTTATTCTGATGAATCCAAGGAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCTCGTGAGCTTGACAAAAATCAACCAACCTTAGCCAAGACAGTTGTTGATGTTCGCAACAAGGTGAAACCTCCTCTGCCAAGAAACTATTTTGGGAATGGTTTGTCTACCACAGTGACAACGACATGCTGCGTTGGAGACATCATATCAGAACCGGTGAGTTATGGTGCAAAAAGGATAAGAGAAGCAGTGGAAAGGGCTTCAAATGACGAGTACATAAGATCACATCTGGAGTATGTAGCGCGACAAGAGAGAGTGGATGTGATTAGGACTCAGTCGTCGGAAGAGCATAAAGCAAATGTGTTCTTCTCTGGGAACCCCAACATTGTGCTTGGAAGTTGGTTGCAGATGCCATTGTATGAAGCAGATTTTGGTTGGGGAAAGCCAAATCATTTCGGTCAAACCATTGTGGCTCCCTTCGATCTTGCAATTTTGGCTCCAACCCGAGATGCGGATGGCTCCATTGTTATCTTCGTGCATTTTCAGATGGCGCACATGCACAATTTCATCAAGTTCTTTTGGGATAATTTATGA 1365 0.4388 MASIIASYVVTPKEETPKGDFCLTESDQTKRWSHATTIYVYNNNNNVNVNELVQRMRDSLSHILVHYYPLSGRLSWTEGGRLKMDCNAKGALLLQAESKKTMAEYGDFSPNDDAIKELMPNIDYSQPMEDIPLFLAQVTKFHGDGNAIAISTAISHTMSDGVSAVHFINLWAKLTRGETLDPNELPFLDRNVLTAAGLPASRRFDHPEFKPLPLILGRTDNIEEQKKKTRFTLLKLTAEQVQKLKQKANIGYSDESKERPYSRFEAIGAHIWRCACMARELDKNQPTLAKTVVDVRNKVKPPLPRNYFGNGLSTTVTTTCCVGDIISEPVSYGAKRIREAVERASNDEYIRSHLEYVARQERVDVIRTQSSEEHKANVFFSGNPNIVLGSWLQMPLYEADFGWGKPNHFGQTIVAPFDLAILAPTRDADGSIVIFVHFQMAHMHNFIKFFWDNL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00005 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
Stsc181632g00005 454 Gene3D - 218 453 IPR023213 -
Stsc181632g00005 454 Pfam Transferase family 4 447 - -
Stsc181632g00005 454 Gene3D - 2 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00005 Stsc-Chr181632 24826 26757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00005 7 452 Monolignol Biosynthesis Gene Families AT5G48930 31.839 3.87e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00005 K13065 - gmx:100779814 483.796