Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00004 ATGGCATCAATCATAGCATCGTATGTAGTCACACCAAAAGAAGAAACCCCAAAGGGTTTATTCTGCTTATCAGAGAGTGACCAAATGTGGCGTTGGAGTCATTCAACCACACTCTATGTTTACAATGACAACAACAATGTGAATGTGAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCAAATTCTGGTTCACTACTATCCCTTATGTGGACGCTTGAGTTGGACACAAGGTGGCCGTTTGAAAATGGATTGTAACGCAAAGGGAGCCATCCTGCTTCAAGCTGAATCCAAGAAAACAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCACCAAAGACCTCATACCAAAGATTGATTACTCTCAACCCATAGAAGACATTCCTCTGTTGCTTGCACAAGTCACAAAGTTCCATGGTGATGGCAATGCCATTGCAATAGGAACTGCCATATCTCATCCAATGAGTGATGGGGTTTCAAGCATTCACTTCATAAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCACATGAATTACCATTTCTCGACCGGATGGTGTTCACAGCCTCTAGCCTGCCGGCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACTCGTCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAAGGGCTGCAATGTTTAAGTTAGCTGCAGAACAGGTGCAGAAATTGAAGCAAAAGGCAAATATTGATGATTCTGAATCCAAGGAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCTCGTGAGCATGACAAAAATCAACCAACCTTAGTGAAGACAGTGGTTGATGTTCGCAACAAGGTGAATCCTCCTCTACCAAAAAACTACTTTGGGAATGCTTTGGGTTCCACAGTGACATCAACATGCTGCGTTGGAGATATCATATCAGAGCCGCTGAGTTATGGTGCAAAAAGGATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACGAGTACATAAGATCTCAACTGGACTTTGTAGCGCAACAAGAGGGAATGGATAAAATTAGGACTCAGTTCCTGGAAAAAGGAGAGTACAGAGCAAATGTGTCCTTCTATGGGAACCCTAACATTATGCTTGGAAGTTGGACGCGAATGCCCATCTATGAAGCAGATTTCGGTTGGGGAAAGCCAGATTATTTCAGTCCAACCGCCGTGTCTCCCTTCGATATTGGAATTGTGGCTCCAAGCCCTGAAGGAGATGGCTCCGTTGTTGTGTTACTGTGTTTTCAGATACAACACATGCAGAGTTTCATCAAGCACTTTTGGGATATATAA 1377 0.4408 MASIIASYVVTPKEETPKGLFCLSESDQMWRWSHSTTLYVYNDNNNVNVNVNVNELVQRMRDSLSQILVHYYPLCGRLSWTQGGRLKMDCNAKGAILLQAESKKTMAEYGDFSPNDDATKDLIPKIDYSQPIEDIPLLLAQVTKFHGDGNAIAIGTAISHPMSDGVSSIHFINSWAKLTRGDALGPHELPFLDRMVFTASSLPALRRFDHPEFKPPPLVLGRTDNIEEQKKKTRAAMFKLAAEQVQKLKQKANIDDSESKERPYSRFEAIGAHIWRCACMAREHDKNQPTLVKTVVDVRNKVNPPLPKNYFGNALGSTVTSTCCVGDIISEPLSYGAKRIREAVERVSNDEYIRSQLDFVAQQEGMDKIRTQFLEKGEYRANVSFYGNPNIMLGSWTRMPIYEADFGWGKPDYFSPTAVSPFDIGIVAPSPEGDGSVVVLLCFQIQHMQSFIKHFWDI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00004 458 Pfam Transferase family 4 455 - -
Stsc181632g00004 458 Gene3D - 2 215 IPR023213 -
Stsc181632g00004 458 Gene3D - 222 458 IPR023213 -
Stsc181632g00004 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00004 Stsc-Chr181632 18906 20782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00004 7 458 Monolignol Biosynthesis Gene Families AT5G48930 33.554 1.76e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00004 K13065 - gmx:100779814 478.404