Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00003 ATGGTATCAATCAAAGCATCTTATGTAATCACACCAAAAGAAGAAACTCCAAAGGGTTTTTTCTGTTTATCAGAGAGTGACCAAATGTGGCGTTGGAGTCATTCAACCACACTCTATGTTTACAATGACAACAACAATGTGAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGATTCCCTTAGCCAGATTCTGGTTCACTACTATCCATTATGTGGACGCTTGAATTGGACACAAGGTAGCCGTTTGAAAATGGATTGTAACGGAAAGGGAGCCATGCTGTATGAAGCTGAATCCACAAAATCAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAACATTGATTACTCTCAACCCATAGAAGACATTCCGCTGTTGCTTGCACAAGTCACAAAATTCCATGGTGATGGCAATGCCATTGCTATAGGAACTGCCATATCTCATCCAATGAGTGATGGGGTTTCAGGGATTCACTTCATAAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCACATGAATTGCCATTTCTCGACCGAATGTTGTTCACAGCCTCTAGCCTGCCGTCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACTCGTCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAATGTTTACATCGTTGAAGCTAACAGCAGAACAGGTGCAGAAACTGAAGCAAAAGGCAAATATTGGTTATTCTGATGAATCCAAGGAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGGTGTGCTTGTATGGCTCGTGAGCATGACAAAAATCAACCAACCTTAGCGAAGACAGTCGTTGATGTTCGCAACAAGGTGAATCCTCCTCTACCGAAAAATTATTTTGGGAATGCTTTGGCTTCCACGGTAACATCAATATGCTGTGTTGGAGATATCATATCAGAACCGCTGAGTTATGCTGCAAAAAGGTTAAGAGAAGCGGTGGAAAGGGTTTCAAATGACGAGTACATAAGATCACAAATGGAGTTTGTAGCGCAACAAGAGGGAATGGATAAGATTAGGACTCAGTTCCTGGAAAAAGGAGAGTATAGAGCAAATGTGTCCTTCTATGGGAACCCTAACATTTTTCTGGGAAGTTGGACGCGTATGCCCATCTATGAAGCAGATTTTGGTTGGGGAAAGCCAGACTATTTCGGTCCAACCGGCGTGTCTCCCTTTGATCTTGGAATTGTGGCTCCAAGCTCTGATGGGGATGGCTCCGTTGTTGTCTTACTGAATTTTCAGATACAACACATGAAGAATTTCATCAAGCACTTTTGGGATATATAA 1374 0.4294 MVSIKASYVITPKEETPKGFFCLSESDQMWRWSHSTTLYVYNDNNNVNVNVNELVQRMRDSLSQILVHYYPLCGRLNWTQGSRLKMDCNGKGAMLYEAESTKSMAEYGDFSPNDDAIKELIPNIDYSQPIEDIPLLLAQVTKFHGDGNAIAIGTAISHPMSDGVSGIHFINSWAKLTRGDALGPHELPFLDRMLFTASSLPSLRRFDHPEFKPPPLVLGRTDNIEEQKKKTMFTSLKLTAEQVQKLKQKANIGYSDESKERPYSRFEAIGAHIWRCACMAREHDKNQPTLAKTVVDVRNKVNPPLPKNYFGNALASTVTSICCVGDIISEPLSYAAKRLREAVERVSNDEYIRSQMEFVAQQEGMDKIRTQFLEKGEYRANVSFYGNPNIFLGSWTRMPIYEADFGWGKPDYFGPTGVSPFDLGIVAPSSDGDGSVVVLLNFQIQHMKNFIKHFWDI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00003 457 Pfam Transferase family 1 454 - -
Stsc181632g00003 457 Gene3D - 220 457 IPR023213 -
Stsc181632g00003 457 Gene3D - 1 213 IPR023213 -
Stsc181632g00003 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00003 Stsc-Chr181632 13547 16120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00003 2 457 Monolignol Biosynthesis Gene Families AT5G48930 33.698 2.05e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00003 K13065 - gmx:100779814 481.87