Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00002 ATGGTATCAATCAAAGCATCTTATGTAGTTACTCCAAAGGAAGAAACTCCAAAGGGTTTATTCTGCTTATCAGAGAGTGACCAATTGTGGCGTTGGAGTCATACATCCACAATCTATGTTTACAACAACAACAATGTGAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAAAGAGTCTCTTAGCCAAATTCTGGTTCACTACTATCCCTTATGTGGGAGGTTGAGTTGGACAGAAGGTGGCCGTTTGCAAATGGATTGTAACACAAAGGGAGCCATCCTGCTTCAAGCTGAATCCAAGAAAACAATTGATGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTTGTACCAAACATTGATTACTCTCAACCCATAGAAGACATTCCTCTGTTTCTGGCACAAGTCACAAAGTTCCATGGTGATGGCAATGCCATTGCTATAGCAACTGCCATATCTCATACAATGAGTGATGGGGCTTCACGCTCTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCACATGAATTGCCATTTCTCGACCGGATGGTGTTCACAGCCTCTAGCCTGCCGCCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCGCTCATCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAAGGGATGTAAAATTGAAGCTGACAGCAGAACAAGTGCAGAAATTGAAACAAAAGGCAAATATTGGTGATTCTGAATCGAGACCCGTCAGCAGATTTGAAGCCGTTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCTTGACAAAAATCAACCAACCTTGGCCAAGACAGTCGTTAATGTTCGCAACAAGGTGAATCCTCCTCTACCAAAAAACTATTTTGGGAATGCTTTGGCTTCCACAGTGACATCAACATGCTGCGTTGGAGATATCATATCAGAGCCGCTGAGTTATGGTGCAAAAAGGATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACGAGTACATAAGATCTCAACTGGACTTTGTAGCGCAACAACAGGGAATGGATAAGATTAGGACTCAGTTCTTGGAAAAAGGAGAATACAAAGCAAATGTGTCTTTCTACGGGAACCCTAACATTATGCTTGTAAGTTGGACGAGTATGCCGGCGTATGAAATAGATTTTGGTTGGGGAAAGCCAGATTATTTCGGTCCAACCGTTGTGTCTCCCTTCGATATTGGAATTGTGGGTCCAAGTCCTGAAGGGGATGGCTCCGTTGTTGTCTTCCTGTGTTTTCAGATAGAACACATGCAGAGTTTCATCAAGCACTTTTGGGATATATAA 1362 0.4347 MVSIKASYVVTPKEETPKGLFCLSESDQLWRWSHTSTIYVYNNNNVNVNVNELVQRMKESLSQILVHYYPLCGRLSWTEGGRLQMDCNTKGAILLQAESKKTIDEYGDFSPNDDAIKELVPNIDYSQPIEDIPLFLAQVTKFHGDGNAIAIATAISHTMSDGASRSHFINSWAKLTRGDALGPHELPFLDRMVFTASSLPPLRRFDHPEFKPPPLILGRTDNIEEQKKKTRDVKLKLTAEQVQKLKQKANIGDSESRPVSRFEAVGAHIWRCACMARELDKNQPTLAKTVVNVRNKVNPPLPKNYFGNALASTVTSTCCVGDIISEPLSYGAKRIREAVERVSNDEYIRSQLDFVAQQQGMDKIRTQFLEKGEYKANVSFYGNPNIMLVSWTSMPAYEIDFGWGKPDYFGPTVVSPFDIGIVGPSPEGDGSVVVFLCFQIEHMQSFIKHFWDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00002 453 Pfam Transferase family 1 450 - -
Stsc181632g00002 453 Gene3D - 219 453 IPR023213 -
Stsc181632g00002 453 Gene3D - 1 212 IPR023213 -
Stsc181632g00002 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00002 Stsc-Chr181632 3018 5782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00002 2 453 Monolignol Biosynthesis Gene Families AT5G48930 33.775 7.08e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00002 K13065 - gmx:100779814 478.789