Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181632g00001 ATGAGTGATGGGCTTTCAGCCTTTCACTTCATCAACTCATGGGCCAAACTCACTAGAGGAGATGCATTGGACCCAAATGAATTGCCATTTCTTGACCGAACTGTGTTCACGGCGTCTCGGCTGCCGTCGTCGCGGCGCTTCGACCACCCGGAGTTTAAGCCTCCGCCCATCATCCTGGGAAGAAGAGACAACATTGAAGAACGAAAAAAGAAGACGAGGTTTTTGTTGTTGAAACTCACAGCAGAACAGGTACAGAAATTGAAGCGAAATATCAATATTGATATTGATTATTCTAAGTTCCAGCAGAAACCTTATAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCTCGACAAAAATCAACCAAGCTTAGCGAAAACGGTGGTTGATATTCGAAATAAGGT 428 0.4509 MSDGLSAFHFINSWAKLTRGDALDPNELPFLDRTVFTASRLPSSRRFDHPEFKPPPIILGRRDNIEERKKKTRFLLLKLTAEQVQKLKRNINIDIDYSKFQQKPYSRFEAIGAHIWRCACMARELDKNQPSLAKTVVDIRNKV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181632g00001 143 Gene3D - 1 54 IPR023213 -
Stsc181632g00001 143 Gene3D - 61 143 IPR023213 -
Stsc181632g00001 143 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 140 - -
Stsc181632g00001 143 Pfam Transferase family 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181632g00001 Stsc-Chr181632 289 740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181632g00001 2 143 Monolignol Biosynthesis Gene Families AT5G48930 32.394 1.42e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181632g00001 K13065 - gmx:100778626 159.458