Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181630g00009 ATGGAGGAGGAGGTGTTTGTTGCAATGATGAAGATTAGTTTACCAGTTGGTATTATTATTATTATTATTGTTGGAGGCATATCAATAATATTGATGTGTGTGTACGGTGAAGAGTGGAGCAAGTCCCAAAGGATTAGGAGGAAGCTAAGAATGCAAGGTATAAAGGGGCCTCCACCTTCTTCATTTCTACATGGAAATCTTCCTGATATCAATAGAATCAATAAATCTGCTCATCAACAAGCCGAAGCTGTTCACACAAATAGTTATGATCATCATCGTCATCCTCATCAGGAACTTGACTTCACTGCCTCCCTCTTTCCCTATTTTGAACACTGGAGAAAACAATACGGACTAGTGTACACTTATTCTACAGGGATGAAACAACACTTATATGTGAACCAACCGGAGCTAGTGACAGAAATGAACAAGATTATGACTCTGGAATTGGGTAAGCCTACTCACGTAACAAAGAACCTTGCACCCCTTCTTGGCAATGGCATTTTAAGATCCAATGGCCTTAGCTGGGCACATCAGAGAAAACTTGTTGCTGCCGAGTTCTTCATCGATAAAGTTAAGGGTATGGTGGGTCTAATGATAGAGTCAGCACAACCGTTACTAACAAAGTGGGAGAAACTTTTAGAGGAAGAAGGAGCCATTGCTGAAATTGAGGTTAATAAAGATTTGAGAATCTTAGCGGCTGATATTATTTCAAGAGTTTGTTTTGGCCATTCTTATTGCAAGGGGAAGCAAGTTTTTTCTAAACTTAGATTCATGCAGACGACCATGTCCAAGCATGGTACCTTTCTTTTTGGCGTCAAAGGTCTCTGGGACAAATTAAACTTCCTGAAAAAGAAGGAAAACGAGGTTAGCATGAAGGAGATGGAGACAGAGATAGAATCATTGATTTGGGAGTTAGTGGAGGAACGCAAACAAGAGTGCTCGGAGAAACATTGTTTAGAGAAAGATTTGATGCAGCTACTATTAGAAGCAGCAGCAATTGATGAAGGTTTGCCAAAGAACTCTGGGAAGCAATTCGTTGTGGATAATTGCAAGAACATATACTTTGCTGGGCATGAAACCATTGCTATCACAGCTTCTTGGTGCTTGATGCTTCTTGCTAAGTACCCTCACTGGCAAACTCGTGTAAGGGATGAGATCGTTGAACACTTTCCCACTGGCATACCAGATGCAGATTCTCTCCCTCTCTTGAAAACGTTGAATATGGTGATTCAAGAAGTGCTACGTTTATACCCACCAGCAGCCTTTGTTTCAAGGGAGGCATATGAAGATATTCAAATTGGAAACCTTCATGTCCCTAAAGGAGTTTGTTTATGGACTCTGATTCCAGCAATGAATAGGGACCCTGACAATTGGGGACCAGATGCAAATGAATTTAAACCAGAAAGGTTCAGTGAGGGTCTCTCTAAAGCTTGCACGTATCCACAAGCATATGTACCATTTGGATTGGGTCCTCGCTTGTGTCTAGGTAAAAATTTTGCAATAGTTCAGGTAAAGGTTGTGTTGGCACTCATCATTTCCAAGTTTAGCTTCTCTTTATCTCCAAGTTATAAGCATTCTCCCAAATATAGGATGATTATAGAACCAGGATATGGTGTGCATATCCTTATTCGAAAGATCTAA 1641 0.4052 MEEEVFVAMMKISLPVGIIIIIIVGGISIILMCVYGEEWSKSQRIRRKLRMQGIKGPPPSSFLHGNLPDINRINKSAHQQAEAVHTNSYDHHRHPHQELDFTASLFPYFEHWRKQYGLVYTYSTGMKQHLYVNQPELVTEMNKIMTLELGKPTHVTKNLAPLLGNGILRSNGLSWAHQRKLVAAEFFIDKVKGMVGLMIESAQPLLTKWEKLLEEEGAIAEIEVNKDLRILAADIISRVCFGHSYCKGKQVFSKLRFMQTTMSKHGTFLFGVKGLWDKLNFLKKKENEVSMKEMETEIESLIWELVEERKQECSEKHCLEKDLMQLLLEAAAIDEGLPKNSGKQFVVDNCKNIYFAGHETIAITASWCLMLLAKYPHWQTRVRDEIVEHFPTGIPDADSLPLLKTLNMVIQEVLRLYPPAAFVSREAYEDIQIGNLHVPKGVCLWTLIPAMNRDPDNWGPDANEFKPERFSEGLSKACTYPQAYVPFGLGPRLCLGKNFAIVQVKVVLALIISKFSFSLSPSYKHSPKYRMIIEPGYGVHILIRKI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181630g00009 546 Pfam Cytochrome P450 103 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 Gene3D Cytochrome P450 39 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS P450 superfamily signature 356 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 365 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 231 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 113 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 PRINTS E-class P450 group I signature 345 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 Coils Coil 291 311 - -
Stsc181630g00009 546 SUPERFAMILY Cytochrome P450 96 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181630g00009 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Stsc181630g00009 546 PANTHER CYTOCHROME P450 FAMILY MEMBER 38 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181630g00009 Stsc-Chr181630 26067 45161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181630g00009 137 543 Cytochrome P450 AT5G24900 55.474 1.48e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181630g00009 K20661 - gmx:100815776 750.355