Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181626g00004 ATGAATAACAAGATAGAGGGATACACAAAGATATCTAAAAAGGTTGTTACAATTTTTGTTGTATTGAGCTGCATTGTGGGGCCAACTTCTTCTCAACCAGGCCCCGGCACAGGCGGCGGCCCCGGCGCCGGTGCCAACGGCCTCCCCAATGAGGCTGCAGTTAAATTATTTCAACAGGAAATGTACAAAAACATGGGTGGTTACACCAAAGTCTTCAAGGAATCAATCAAGAAACAGTTGGGATTTTGCATTGTGGATGCGGACCGAGATTGGGATGGTGCCTTCAATTTTTCCAAAGATCTATCTTTCTTGACCAACTGTGCCAAGACTGTACAAGGGGATATTACACAGAGAATGTGCATAGGATCAGAACTTGATATGTATGCATCACTATTCAAAACCGGAAAAAGGTTTGTGAATCCAAATGTGAACTGCAACATGAGCACATGGCTGAATGGGTGTGAACCTGGTTGGGCATGTAAGGCTAATGCGAAAGTTGAGCTTAACAGCACCCAAAAGGATATACCTGTTAGAAATTCAGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCCTGGTCTTACTTGCATGATACCTTGTCCATTGGGAGCTTATTGTCCAAAGGCAAATCTAAACGCAACAAGTGGAGTGTGCCAACCATATCGTTATCAGATACCTCCTGGAAAGTTAACACATACTTGTGGAGGAGCAGATATTTGGGCTGATATTAGAAACAGTGCAGAGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGAGTATGGATGCTTCACTTTGGCAACATGTGAACCTAAATCAGAAAACCAGAATATTACTGCATATGGTGTCCTGGTCTTTGCTGGAGTGTGTTTCATGCTCATTATCATATATAACTGTTCTGATCAAGTTCTTGCGACTCGAGAAAGAAGACAAGCAAAATCGAGAGAAAGGGCTGCAGCACACGTGAGAGAAACACAAGCGCGAGAGAAATGGAAATCAGCAAAAGACATAGCCAAGAAGCATGCAGTAGGCCTACAATCGAGTTTGTCGCGAACATTTTCGCGCCAAAAGACTAACAAGGGATCAGGAACCTTACCGCCTGCAGCGACTAAAAAGGAAAAGAAAAAGGACAAGAGCAACCTCAGCAAGATAATAAGTGACATTGAGGAAGATCCTGATAGCCAGGAAGGTTTTAATATTCAGATAGGAGATAAGAATGTTAAGAAGCAAGCACCACCAAAGGGTAAGCAATTGCATACTCAGAGTCAAGTGTTCAAGTATGCATATAACCAGATTGAGAAAGAGAAGGCCTTACAGGAACAAATGAAGAACATGACCTTCTCTGGAGTTATCTCAATGGCTAATGAGATTGAGATAAGGAAAAGGCCTACCATTGAGGTTGCATTTAAAGATTTAACACTCACTTTGAAAGGAAAAAACAAACACCTATTAAGAAGTGTGACAGGTAAGTTGTATCCCGGCCGGGTTTCGGCAGTTATGGGACCATCTGGGGCCGGCAAGACAACATTTCTTTCTGCCCTGACCGGAAAAGCAGCTTCTGGATGTACAACAAGCGGACAAGTTCTTGTAAACGGACAGGAATCGCCAATTCGGGCGTATAAGAAAATCATTGGATTTGTGCCACAAGATGATATTGTTCATGGCAATTTGACAGTGGAGGAAAATCTTTGGTTCAGTGCCAGATGCAGGCTCTCGGCAGATCTACCAAAAGAGGAGAAGGTTTTAGTGGTCGAAAGAGTCATCGAGGCTTTGGGTTTGCAGGCAATTAGAGACTCTATGGTTGGGACGGTGGAGAAGAGAGGAATCTCCGGAGGTCAGAGGAAAAGAGTAAATGTTGGACTCGAAATGGTGATGGAACCTTCACTTCTAATTCTAGATGAACCAACATCTGGTTTGGACAGTTCATCATCTCAGTTACTTCTTAGAGCACTTAGACGTGAAGCCCTTGAAGGAGTAAACATATGTATGGTCCTTCACCAACCGAGCTACACATTGTTCAGGATGTTTGATGACTTTATATTGCTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAGGTGGAAGAGTACTTTTCCGGCTTGGGGATCGTTGTCCCTGACCGCGTCAACCCTCCGGATTACTACATTGACATTTTAGAAGGAATCATAAAGATACCAGCAGGTTCAGGAGTGAGCCAGAAACAATTACCCGTTAGATGGATGCTGCATAATGGCTACCCGGTGCCGATGGATATGCTGGAGCTCATTGAAGGAATGTCTACTAACAACACTACTGGTTCACCAAGTGTAGCAGCTTCTACTCCAGATAATAATGTTGCTGGCCAATCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGGCCAGTGTTGAGTCGAAGAAGGACAACTTCACCTATAAATTCTTGACTTCGCACGATTTGTCCAATAGGAAGACACCTGGATCATTCACACAATACAAGTACTTTCTTGGAAGAGTTGGTAAGCAGAGGCTACGAGAAGCTAGATCACTCGGTGTGGATTTCATGATTTTGCTTCTAGCTGGACTTTGCCTAGGAACACTAGCAAAAATGAGTGATGAATCATTTGGAGCAACTGCACTCCTTTCGAAGATTGCGGCTTTGAGATCCTTCTCCTTGGATAAGTTGCACTACTGGAGGGAGAGTGCTTCTGGCATGAGCAGCCTTGCATACTTTCTTTCAAAGGACACGGTTGACCATTTCAGTACACTCATCAAACCTCTGATGTATCTCTCCATGTTCTATTTCTTCAACAACCCAAGATCTTCTTTTCAAGCCAACTATGCTGTTCTGCTGTGTTTGGTGTACTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTCCTTGAACCTGGTCCAGCTCAGCTGGTTAGCATTCTGATCTTTTTTACTCTTCTCGCTTCGTACACCTAG 2961 0.4363 MNNKIEGYTKISKKVVTIFVVLSCIVGPTSSQPGPGTGGGPGAGANGLPNEAAVKLFQQEMYKNMGGYTKVFKESIKKQLGFCIVDADRDWDGAFNFSKDLSFLTNCAKTVQGDITQRMCIGSELDMYASLFKTGKRFVNPNVNCNMSTWLNGCEPGWACKANAKVELNSTQKDIPVRNSDCQPCCEGFFCPPGLTCMIPCPLGAYCPKANLNATSGVCQPYRYQIPPGKLTHTCGGADIWADIRNSAEVLLQNRFYCSREYGCFTLATCEPKSENQNITAYGVLVFAGVCFMLIIIYNCSDQVLATRERRQAKSRERAAAHVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRQKTNKGSGTLPPAATKKEKKKDKSNLSKIISDIEEDPDSQEGFNIQIGDKNVKKQAPPKGKQLHTQSQVFKYAYNQIEKEKALQEQMKNMTFSGVISMANEIEIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKAASGCTTSGQVLVNGQESPIRAYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIEALGLQAIRDSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGLGIVVPDRVNPPDYYIDILEGIIKIPAGSGVSQKQLPVRWMLHNGYPVPMDMLELIEGMSTNNTTGSPSVAASTPDNNVAGQSFAGELWQDVKASVESKKDNFTYKFLTSHDLSNRKTPGSFTQYKYFLGRVGKQRLREARSLGVDFMILLLAGLCLGTLAKMSDESFGATALLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLMYLSMFYFFNNPRSSFQANYAVLLCLVYCVTGIAYVLAIFLEPGPAQLVSILIFFTLLASYT 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181626g00004 986 Gene3D - 456 704 IPR027417 -
Stsc181626g00004 986 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 420 985 - -
Stsc181626g00004 986 SMART AAA_5 494 696 IPR003593 GO:0016887
Stsc181626g00004 986 Pfam ABC transporter 485 638 IPR003439 GO:0005524
Stsc181626g00004 986 ProSitePatterns ABC transporters family signature. 610 624 IPR017871 GO:0005524|GO:0016887
Stsc181626g00004 986 MobiDBLite consensus disorder prediction 316 335 - -
Stsc181626g00004 986 FunFam ABC transporter G family member 24 462 705 - -
Stsc181626g00004 986 CDD ABCG_EPDR 466 693 - -
Stsc181626g00004 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 703 IPR027417 -
Stsc181626g00004 986 MobiDBLite consensus disorder prediction 348 381 - -
Stsc181626g00004 986 Pfam ABC-2 type transporter 667 980 IPR043926 GO:0140359
Stsc181626g00004 986 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 468 710 IPR003439 GO:0005524
Stsc181626g00004 986 MobiDBLite consensus disorder prediction 348 366 - -
Stsc181626g00004 986 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181626g00004 Stsc-Chr181626 34984 39858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181626g00004 495 689 Calmodulin-binding Proteins AT2G36910 31.343 8.57e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181626g00004 - - gmx:100794093 1441.79