Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181618g00002 ATGGAAGAGGTCTTGAATTCCATTATCCAAGCTTGCGAATTAGCGAAGAAATTTGAATCGAAGTTACTACTACCAAACATGGCTTCTTCCTCTTCCTGCTCCTCCTCCATCACCAATATACAACCTGATATATTGGTTTCTTCCATTGATGAAGTTGTGAAGGCATTCATTGGTGCAAAGGAGAAACTGTTGTTGACTGGGATGAATAATAATTTGATGGGAGCTTCTTCTTCTTCTTCTTTTGCTCCATTGTTCATGCACGAAGCTCAACAAATGGGCGCAAGTTCCTTTTCAATTATGATGCAAGAATGGATGAAATCTTCTACTACAAGCTATGCACACACAATGGATCAGCTTATGTTGCAAATGCAGCAGCATCATCATCAACATCGCGAAAGACAACAAGGACGACTATTCGATGTGAGGGCTGTTTTGAGCTGCGGCCGCGGCATGGATCCTCAGAAGTTAAGGAATGTTGAAGGATCATCTGTAGAGAAATCAATGAAAGGTTTTGAGCTAGAAGTATCACCTTCAAGGCCAAGGAAAAGGAAGAATGATGCGGAGAAGAGAATAGTGAACCTTCCAGCTCAACAACTTGGAAACACAGAAATACCAATGGAAGATGGATTCACTTGGAGAAAATATGGTCAGAAAGAGATACTTGGCTCTAAGTATCAAAGATGGTCAGAACTGCATCTGGGTTCGAATCCTACTGAGAGGTCTACTAGAGATCAGAAATTGCTGAAGAAAGAACAAGATGTTTCTTTTGTTCTTTCCGGGCGATCGGAAAGTAAAGAAATGGTTAATATATTCAAGATAATTATGTATTTACAAAGTACTGTCTCAATTTATCCTATTTCATCAGATCCGGGATAG 876 0.3995 MEEVLNSIIQACELAKKFESKLLLPNMASSSSCSSSITNIQPDILVSSIDEVVKAFIGAKEKLLLTGMNNNLMGASSSSSFAPLFMHEAQQMGASSFSIMMQEWMKSSTTSYAHTMDQLMLQMQQHHHQHRERQQGRLFDVRAVLSCGRGMDPQKLRNVEGSSVEKSMKGFELEVSPSRPRKRKNDAEKRIVNLPAQQLGNTEIPMEDGFTWRKYGQKEILGSKYQRWSELHLGSNPTERSTRDQKLLKKEQDVSFVLSGRSESKEMVNIFKIIMYLQSTVSIYPISSDPG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181618g00002 291 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 83 227 IPR044810 GO:0003700
Stsc181618g00002 291 SUPERFAMILY WRKY DNA-binding domain 203 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181618g00002 291 Gene3D WRKY domain 185 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181618g00002 291 Pfam Plant protein of unknown function (DUF825) 226 291 IPR008543 -
Stsc181618g00002 291 SMART WRKY_cls 206 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181618g00002 291 Pfam WRKY DNA -binding domain 207 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181618g00002 Stsc-Chr181618 21128 24673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181618g00002 1 227 WRKY Transcription Factor Family AT2G40740 30.702 2.36e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181618g00002 DUF825 4.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181618g00002 - - aip:107607129 261.151