Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181606g00007 ATGGCCGTTCAACTCACCCAATCGGCGATAACCACAATTTGCGGCAACAATGTCAGTTCCATTGAGAATCTGAGGCCGGTTTTGCAAGTGATCGGCGTGAAGCTTTTGTCGTCGCCTGAGCCCAGGTACCGCTTGATGCTCTCCGACGGCTCTCACTACCAGCAATCCATACTCGCCACCCAGAAGAACCACTTGCTCTTTTCCGGCACCTTGCAAACAACTTCCATTATCCTCCTCACTAAGTTCACCTCCACCGTTATCCAGAACCGCAAGATTATCATCATCATTGATCTAGATGTCATACTTGAAAAATTTAATCTGATTGGAACTCCTGTGTTAGTGAAATTTGGTGGTGGATCTTATGCAAATCAAAATATGGGTTTCTGCAATCCTGAATCTCAGGCTTCAAGTCCCATTCAAGATTCATATATTCATCAACCTCAGTCCATGCATCAACAGCCAATGAAAGTACCTGAGGCAAAAGAAAATTTCACACCATCAGTTTCCTTGGATATTCAAGCTGTCTTGAAGAGGTGTGAAACTGTTGAAAAGGAAGTTCAGTCATTAAAAGATAGTTTGTCCCTCATCAACAGGAAGGATTCTGAACAAAAGAAGCAGATAGAAGAACTTCGGAAGCAGAATGTAGAGTTGGCCGGCGAGAAAGAGCGCCTCTTACAAGCGATTCAGGGCATGTTGTCCGAAAATCAAAGGATCTAA 717 0.4393 MAVQLTQSAITTICGNNVSSIENLRPVLQVIGVKLLSSPEPRYRLMLSDGSHYQQSILATQKNHLLFSGTLQTTSIILLTKFTSTVIQNRKIIIIIDLDVILEKFNLIGTPVLVKFGGGSYANQNMGFCNPESQASSPIQDSYIHQPQSMHQQPMKVPEAKENFTPSVSLDIQAVLKRCETVEKEVQSLKDSLSLINRKDSEQKKQIEELRKQNVELAGEKERLLQAIQGMLSENQRI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181606g00007 238 SUPERFAMILY Nucleic acid-binding proteins 1 106 IPR012340 -
Stsc181606g00007 238 Gene3D - 3 115 IPR012340 -
Stsc181606g00007 238 Coils Coil 172 227 - -
Stsc181606g00007 238 PANTHER PROTEIN CYCLOPS 156 237 IPR040036 GO:0005634|GO:0036377|GO:0043565
Stsc181606g00007 238 Pfam Replication factor-A protein 1, N-terminal domain 5 102 IPR007199 GO:0003677|GO:0005634|GO:0006260
Stsc181606g00007 238 FunFam Replication protein A subunit 4 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181606g00007 Stsc-Chr181606 41415 43380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181606g00007 1 137 Core DNA Replication Machinery Family AT5G45400 37.500 1.52e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181606g00007 - K07466 adu:107487113 351.673