Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181605g00002 ATGTTTCCGAAAGAGAATAGTAGTAACGGCTACCATCACCAGCCGCCGGCGCCGCCTCCGCCGCCGCTGCCACTGGGAGTGGGTAACATTCACAGCCACAGAGAGCGAGCCCGTCGAGGCACGCGCAGGTCACGTGCTTCCCCAGACAGCCTCGGCCTTAGGGTTTATGACCAGCAACCGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCGAGCTCCTTGCACGGACTTCGACATGGCTTATTTCCATTCTTATGCTCACCTCGGCATCCACCAAGAGATGATCAAGGATCGCGTGAGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTCATTGCAGGCAAAGTTGTAGTTGACGTTGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGCGCAAAACGGGTATATGCAGTTGATGCGAGTGATATTGCCTTGCAGGCAAATGAAGTTGTGAAAGCAAATAACCTGTCTGATGTTATTGTTGTATTGCATGGGCGGGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACTGCTAGAGATCGCTGGCTTAAACCCGGGGGTCTTATCCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTAACACATTCTGATAGATACGGTGAAAGCATTGACTTCTGGCGCAATGTCTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAGCCTTCTGTGGAGACAATTACTGGTGAAAATATTTTGACATGGCCACATGTGGTGAGTGTGGCAGTGTTGTGGCTGTTAAGTTTCTTGGACTTTGCATCTATCTGA 906 0.4801 MFPKENSSNGYHHQPPAPPPPPLPLGVGNIHSHRERARRGTRRSRASPDSLGLRVYDQQPQQQQQQQQQQQQRAPCTDFDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHSDRYGESIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVSVAVLWLLSFLDFASI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181605g00002 301 Gene3D - 224 291 - -
Stsc181605g00002 301 Pfam Ribosomal protein L11 methyltransferase (PrmA) 118 192 - -
Stsc181605g00002 301 FunFam Protein arginine N-methyltransferase 6 76 222 - -
Stsc181605g00002 301 CDD AdoMet_MTases 122 221 - -
Stsc181605g00002 301 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 80 301 IPR025799 GO:0016274|GO:0018216
Stsc181605g00002 301 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 54 286 IPR025799 GO:0016274|GO:0018216
Stsc181605g00002 301 MobiDBLite consensus disorder prediction 1 50 - -
Stsc181605g00002 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 285 IPR029063 -
Stsc181605g00002 301 MobiDBLite consensus disorder prediction 56 75 - -
Stsc181605g00002 301 Gene3D Vaccinia Virus protein VP39 77 222 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181605g00002 Stsc-Chr181605 5171 13119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181605g00002 45 285 C2H2 Transcription Factor Family AT3G12270 40.316 8.39e-55 186