LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc181605g00001	ATGTTTCCGAAAGAGAATAGTAGTAACGGCTACCATCACCAGCCGCCGGCGCCGCCTCCGCCGCCGCTGCCACTGGGAGTGGGTAACATTCACAGCCACAGAGAGCGAGCCCGTCGAGGCACGCGCAGGTCACGTGCTTCCCCAGACAGCCTCGGCCTTAGGGTTTATGACCAGCAACCGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCGAGCTCCTTGCACGGACTTCGACATGGCTTATTTCCATTCTTATGCTCACCTCGGCATCCACCAAGAGATGATCAAGGATCGCGTGAGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTCATTGCAGGCAAAGTTGTAGTTGACGTTGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGCGCAAAACGGGTATATGCAGTTGATGCGAGTGATATTGCCTTGCAGGCAAATGAAGTTGTGAAAGCAAATAACCTGTCTGATGTTATTGTTGTATTGCATGGGCGGGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACTGCTAGAGATCGCTGGCTTAAACCCGGGGGTCTTATCCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTAACACATTCTGATAGATACGGTGAAAGCATTGACTTCTGGCGCAATGTCTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAGCCTTCTGTGGAGACAATTACTGGTGAAAATATTTTGACATGGCCACATGTGGTGAAATATATTGATTGTTATTCTGTTACCATCCGTGAGCTAGAAACTGTAACAACAACATTTAAGTTCAATTCAATGATGCGAGCACCACTGCATGGTTTTGCATTTTGGTTCGATGTTGAATTTAATGGGTCAGAGATACCAAGCAATTATCATTCATCAACTTCATTTACAGATAATCATCTTGTGAATGGTTGTCAGAGGAAAAAGCGGACAAATCCAAGTGAAGCATTGGTCCTGTCCACTGCACCTGAGGACCCTCCAACGCATTGGCAGCAGACGTTGATATACTTTTATGATCCGATAGAATTGGAACAAGATCAAGTAATTGAAGGTCTAGTGACATTGACACAAAGTAAAGAGAATGCTCGCTTTATGAATATTCACCTTGAGTATACTTCGGGAGGGCGATCATATGTCAAAGAGTCTGTAATGAGATGA	1293	0.4501	MFPKENSSNGYHHQPPAPPPPPLPLGVGNIHSHRERARRGTRRSRASPDSLGLRVYDQQPQQQQQQQQQQQQRAPCTDFDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHSDRYGESIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVTIRELETVTTTFKFNSMMRAPLHGFAFWFDVEFNGSEIPSNYHSSTSFTDNHLVNGCQRKKRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGGRSYVKESVMR	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc181605g00001	430	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	86	420	IPR029063	-
	Stsc181605g00001	430	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	80	430	IPR025799	GO:0016274\|GO:0018216
	Stsc181605g00001	430	FunFam	Protein arginine N-methyltransferase 6	224	428	-	-
	Stsc181605g00001	430	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	118	192	-	-
	Stsc181605g00001	430	CDD	AdoMet_MTases	122	221	-	-
	Stsc181605g00001	430	Gene3D	-	224	429	-	-
	Stsc181605g00001	430	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	54	418	IPR025799	GO:0016274\|GO:0018216
	Stsc181605g00001	430	FunFam	Protein arginine N-methyltransferase 6	76	222	-	-
	Stsc181605g00001	430	Gene3D	Vaccinia Virus protein VP39	77	222	IPR029063	-
	Stsc181605g00001	430	MobiDBLite	consensus disorder prediction	1	50	-	-
	Stsc181605g00001	430	MobiDBLite	consensus disorder prediction	56	75	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc181605g00001	Stsc-Chr181605	1414	13119	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc181605g00001	45	396	C2H2 Transcription Factor Family	AT3G12270	37.602	3.31e-67	223