Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181601g00005 ATGGCGTTGCCGGTGGTGGTAGACACAGAGTACCACAAGGAGGTCGACAAGGCCCGCCGCGATCTCCGCGCACTCATCGCCAACAGGAACTGCGCTCCTATCATGGTTCGCTTGGCCTGGCACGATGCTGGAACCTACGATGTCAATACGAAGACCGGCGGAGCTAACGGTTCCATCAGGAACGAGGAAGAGTATTCACATGGTGCTAACAACGGCTTGAAGAAGGCTCTTGATTTCTGTGAGGAAGTGAAGGCAAAGTATTCCAAGATTACATATGCAGATCTTTACCAGCTTGCAGGCGTTGTTGCAATTGAGGTTACTGGGGGCCCCACAATTGAATTTGTTCCTGGAAGAAGGGACTCCAATGTATGTACAAAAGAAGGCCGGCTTCCTGATGCTAAACTTGGTGTGCCACACCTTCGTAGTATCTTCTATCGAATGGGCCTGTCTGACAAGGATATTGTTGCACTGTCTGGAGCACATACGCTGGGAAGAGCACATGAAGAGAGATCAGGATTTGAAGGCCCTTGGACACAGGATCCTCTGAAGTTTGACAATTCGTACTTTGTGGAACTTCTAAAAGGTGAGACTACGGGTCTGCTTAAACTTCCGACAGACAAGGCCTTGTTGGACGATCCTGAATTTCGCCATTATGTTGAGCTGTATGCAAAGGACGAAGATGCATTCTTCCGGGATTATGCTGAATCACATAAGAAACTTTCGNNNNNNNNNNATTTGCTACAAGTTCAAAACCGATTTCTCCTAAGGATGGGACCATACTAG 783 0.4764 MALPVVVDTEYHKEVDKARRDLRALIANRNCAPIMVRLAWHDAGTYDVNTKTGGANGSIRNEEEYSHGANNGLKKALDFCEEVKAKYSKITYADLYQLAGVVAIEVTGGPTIEFVPGRRDSNVCTKEGRLPDAKLGVPHLRSIFYRMGLSDKDIVALSGAHTLGRAHEERSGFEGPWTQDPLKFDNSYFVELLKGETTGLLKLPTDKALLDDPEFRHYVELYAKDEDAFFRDYAESHKKLSXXXXLLQVQNRFLLRMGPY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181601g00005 260 Gene3D - 18 241 - -
Stsc181601g00005 260 FunFam Cytosolic ascorbate peroxidase 18 136 - -
Stsc181601g00005 260 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Stsc181601g00005 260 FunFam L-ascorbate peroxidase, cytosolic 131 237 - -
Stsc181601g00005 260 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 8 242 IPR044831 GO:0004601|GO:0034599
Stsc181601g00005 260 CDD ascorbate_peroxidase 4 241 - -
Stsc181601g00005 260 Gene3D Peroxidase, domain 2 131 237 - -
Stsc181601g00005 260 ProSiteProfiles Plant heme peroxidase family profile. 32 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 195 220 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 SUPERFAMILY Heme-dependent peroxidases 12 244 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 Pfam Peroxidase 19 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181601g00005 260 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181601g00005 Stsc-Chr181601 45474 49240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181601g00005 90 240 Peroxidase AT4G16270 34.555 3.69e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181601g00005 K00434 - csv:101206941 429.483