Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181598g00008 ATGGGCTTTAGGTATTGGGCTTATGAGGCTAAGCCCACGGTAAGGTTTCATTCACCGTTTGATGGTGTGGTTGGCAAGCCCACCAGTGCGGCGAAGGTGGCCATGGCTGAATCAACGGCGAACAAGCAGAGCAGCAGCAACAACCACGGGAACGAAGAACAGGACGATGACTACATGGGTGACCTCTCACGCTTCCTTCCATCTGAGCCTCTTCCAAAGCCTTCCTCCAAAAAGATTTCTGGCAACAAAGACCCTCTGATCAGCTCTTCCAAGAATAAGTTAAAATCACTTAGCTGGCAAGAACGTCGAAAACTTGAAAGAGAAAGAAAGCAGCAAGAAGAGGATGAGCAAACATTGGCAAGCGTGGAAGCTCCAATACCACAATCCAATATTGGGTTTAAGATGCTCAAACAAATGGGTTATACACCTGGTGCTACCCTTGGCAAACAGGGTTCAGGTAGGGCTGATCCAGTGGGGATTGAAATCCGGCGATCACGAGCTGGTATTGGCTTAGATGATCCTCACAAGGAGAAGAGGAAAAAGGAGGAAATCGTGGCTGAGAGAAAAAAGAGGAAAGAGGAAGATCTAATGGAAGACTTTGGGTTGAGACAGAAGTCACGGTGGCAGAGTAAGAGGATTGTAGTCAATTTTCATAAGGCAAAGGCTGCCCTTGATCAGTTAGAGAATAGAGAAATCATTGAGCCGGAAAAGAACGCGGATGATGAAGAGGATGAAGATGAGGAAGAGGAAGAAATAACAGAAGAGGATTTGCAAGATGTTTTGATGAAACTGAGGGATGATCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTGGCCAACTGTCCTGGAACCAATGAAGATGATCACTAA 891 0.4579 MGFRYWAYEAKPTVRFHSPFDGVVGKPTSAAKVAMAESTANKQSSSNNHGNEEQDDDYMGDLSRFLPSEPLPKPSSKKISGNKDPLISSSKNKLKSLSWQERRKLERERKQQEEDEQTLASVEAPIPQSNIGFKMLKQMGYTPGATLGKQGSGRADPVGIEIRRSRAGIGLDDPHKEKRKKEEIVAERKKRKEEDLMEDFGLRQKSRWQSKRIVVNFHKAKAALDQLENREIIEPEKNADDEEDEDEEEEEITEEDLQDVLMKLRDDHNYCLFCGCKYESKDALLANCPGTNEDDH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181598g00008 296 ProSiteProfiles G-patch domain profile. 128 174 IPR000467 GO:0003676
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 166 197 - -
Stsc181598g00008 296 Pfam G-patch domain 128 171 IPR000467 GO:0003676
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 81 95 - -
Stsc181598g00008 296 SMART DUF4187_2 242 296 IPR025239 -
Stsc181598g00008 296 SMART G-patch_5 126 172 IPR000467 GO:0003676
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 34 48 - -
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 228 254 - -
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 237 254 - -
Stsc181598g00008 296 Coils Coil 102 122 - -
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 96 117 - -
Stsc181598g00008 296 Pfam Domain of unknown function (DUF4187) 243 296 IPR025239 -
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 34 130 - -
Stsc181598g00008 296 PANTHER UNCHARACTERIZED 52 296 IPR039249 -
Stsc181598g00008 296 MobiDBLite consensus disorder prediction 165 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181598g00008 Stsc-Chr181598 39730 42389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181598g00008 120 170 C2H2 Transcription Factor Family AT5G26610 43.137 1.55e-06 47.0