Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181598g00007 ATGGATCGCTTTTTCATCTCCGTGCATTTTTTCTTCGTTGTCTTCTCGGCAGCTTTGATTTCTCAGAATTCAGCATTCACTGATCCTCTTGATGTCACAGCTCTCCAGGATCTATACAGAACCTTAAACACTGCACCGGTGCTGGAAAGATGGGATGGCGATGATCCCTGTCAGGAGTCTTGGACAGGAGTAGCATGCTCTGGATCATCAGTTATACACCTCAAACTTCAAGGATTAAACCTCACTGGATATCTTGGAGGCCTTCTCCACAATCTACAGAGTTTGAAGCACCTTGATGTCAGTTCTAACAACATAGTGGGAGAAATACCATCTGGTTTACCCCCAAATGTCACACACATGAATTTAAGCCACAACTTCTTATATGGACCCGTTGGCAATGTGTTTACTGGGTTAGATGACCTCAAAGAAATGGACCTTTCCTACAACAATTTCACTGGAGATTTGCCGAGTTCATTTGGCTCCCTGAAAAACCTTGGAAAATTGTATCTGGAGAACAATAGATTCACTGGATCAGTCACCTACCTGGCTGAGCTTACTCTCACTGATTTGAACATCCAGGATAATCTGTTTAGTGGGATACTTCCACCACATTTTCAGACTATACAAAACTTATGGATTGGAGGGAATAAATTCCAAGCAGTAGACGAATCTCCTCCCTGGCCTTTTCCTTTGGACAATGTATCAGTTGAGCATAATAGTACTCGTCCACCCACAACGCAAGCAAATGCCATAGAGAACTATGCTCCTGCTAAAGCAATCAAGCACAAGAAGAAACACATGGGCCCTGGAGGAATAGCTCTTACAGTTGGTGGAGTGACATTATTTGCAGCAGGATTGGCACTTTTCTTTGCGACTCGTTTGAATAGAAATTCTGAGAGACAAAAGAAATCGGAAAGCATTGAAAGGTCATTCCCTTCTCATCCATTCAGTCTCAAAGGTAAATTCTTAAGGAGAGAGCGTGGATAG 987 0.4286 MDRFFISVHFFFVVFSAALISQNSAFTDPLDVTALQDLYRTLNTAPVLERWDGDDPCQESWTGVACSGSSVIHLKLQGLNLTGYLGGLLHNLQSLKHLDVSSNNIVGEIPSGLPPNVTHMNLSHNFLYGPVGNVFTGLDDLKEMDLSYNNFTGDLPSSFGSLKNLGKLYLENNRFTGSVTYLAELTLTDLNIQDNLFSGILPPHFQTIQNLWIGGNKFQAVDESPPWPFPLDNVSVEHNSTRPPTTQANAIENYAPAKAIKHKKKHMGPGGIALTVGGVTLFAAGLALFFATRLNRNSERQKKSESIERSFPSHPFSLKGKFLRRERG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181598g00007 328 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Stsc181598g00007 328 SUPERFAMILY L domain-like 45 224 - -
Stsc181598g00007 328 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Stsc181598g00007 328 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 303 IPR046959 -
Stsc181598g00007 328 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 116 229 - -
Stsc181598g00007 328 Pfam Leucine Rich Repeat 94 113 IPR001611 GO:0005515
Stsc181598g00007 328 Gene3D Ribonuclease Inhibitor 29 255 IPR032675 -
Stsc181598g00007 328 MobiDBLite consensus disorder prediction 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181598g00007 Stsc-Chr181598 36390 39181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181598g00007 3 318 Strubbelig Receptor Gene Family AT5G06820 47.230 5.88e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181598g00007 - - gmx:100793182 438.728