Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181598g00006 ATGGCGGGCTTGTCTTACATTGAAGAGGAGAAGTTCTTAGATGCAGTTTGCACCGCTGCCCGTTTAAAACATCCTAACATTGTTGCACTCAAAGGTTACTGTTTGGAGCATGGACAGCATCTTCTCGTCTACGAGTATGTCAGAAGTTTAACTCTAGAAGACGCTCTTCACAGTGATGCATACAAGCCTTTGTCATTGGCCATCCGTCTCCAAATTGCTCTTGGTGTTGCTCAGGGTCTGGACTATTTGCACTCCACCTCTCCTCCTGTAGCTCATGGCAACTTGAAGTCTGCCAATATTCTACTAGATGAAAACCTAGTGCCTCATATTTGTGACTGCGGCTTGACTATTTTGAGACCACTGACAAGCAACAAGATCAAAGCTCGAGCTTCGGAGATTGCTATCAGAGAAGCAGGCTACTATTCACCAAACCATGGTAAACCAGGAACTAACAGCAGCACAGAGAGTGACATCTTTGCATATGGGGTGTTGCTTTTGGAACTGTTAACCGGAAGGGAACCTTTCGATGGTTCCAGGCCCAAGGAAGAGCAATATCTCGCGCAATGGGCTTCATCCAGGCTTCATGACAGCAAGACCTTGGAACAGATGGTGGATCCTGCAATTCAAAAGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATACTTTCTCTCTGCCTACAGCCTGTAAAGGAATTTCGGCCACCAATGTCTGAAATAGCAGAATCTATTGCTTCTTTCATGCAACGGCTCAACGTGACATATGGTGCAGCAGCAGATGGGAATGGACCTGATCCACTCGAGAGGTCATTCCGCACAACTACAACTCATTTTGTTGCATCGCCCACATTGAGCTACGTGTCCGCCTGA 873 0.4639 MAGLSYIEEEKFLDAVCTAARLKHPNIVALKGYCLEHGQHLLVYEYVRSLTLEDALHSDAYKPLSLAIRLQIALGVAQGLDYLHSTSPPVAHGNLKSANILLDENLVPHICDCGLTILRPLTSNKIKARASEIAIREAGYYSPNHGKPGTNSSTESDIFAYGVLLLELLTGREPFDGSRPKEEQYLAQWASSRLHDSKTLEQMVDPAIQKTFSSKALSRYADILSLCLQPVKEFRPPMSEIAESIASFMQRLNVTYGAAADGNGPDPLERSFRTTTTHFVASPTLSYVSA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181598g00006 290 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181598g00006 290 Gene3D Phosphorylase Kinase; domain 1 3 46 - -
Stsc181598g00006 290 PANTHER OS01G0253100 PROTEIN 9 247 - -
Stsc181598g00006 290 Gene3D Transferase(Phosphotransferase) domain 1 49 260 - -
Stsc181598g00006 290 SUPERFAMILY Protein kinase-like (PK-like) 10 243 IPR011009 -
Stsc181598g00006 290 FunFam Leucine-rich repeat receptor-like protein kinase 47 256 - -
Stsc181598g00006 290 Pfam Protein tyrosine and serine/threonine kinase 8 244 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181598g00006 Stsc-Chr181598 34290 35801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181598g00006 1 290 Strubbelig Receptor Gene Family AT5G06820 57.045 3.42e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc181598g00006 PK_Tyr_Ser-Thr 1.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181598g00006 - - tpra:123896060 438.728