Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181596g00007 ATGACCCTTAAGGGTGGAATCACACAGGCCTGCGCTGCATGCAAATTCCAGAGAAGAAAATGCACACCTGAGTGTCTTCTTGCACCATACTTCCCTGCAGACCAACCCAAAGTGTTCCTTAATGTCCACAAGCTATTTGGGGTGAGCAACATTGTCAAAATATTAAAGGACTTGGAGCCTAGTCAGAAGAAGATTGCCATGGATTCCATAATCATTCAAGCTAATTACCGCGACAAGTACCCGGTTCGTGGCTGCTGGGAAGAAATTTGCAGGCTGCAATACCAAATTTGGCTGGCTGAAGAAGAGCTTCATGCTGTGTATCAGCAGCTTGAGATTTGCAGGCAACACCAACACCAACAACAACACCAAGGGATTCATCAGGGCCTTCATCACGTTGTTCCTGATGATCTTGCATCACAGTTAGAGTTGGGAATGGGGCCACGCGCCACCAACAATGCTCTTCCTCTCTTTAATCACGCGCCACCTCCCCAGCAGCAGCAGCAGCAGCAACAGGTATACAATAATACTACTGTGGCTGCTGCTTTGCCTGTGTCCCAGCAACATTCCTATTCCATCAGCAACAGTGTGGATTATAACTCCCTCTACATTGAATCCAAGGAAAATAACAACAACAATGGAACAAATAATCCTTTGTGGCAAGAAGCTGCTGGAGATTATGATGAGATGCATCCATTTTTTGATACCATTGATGATAGGCAATCATACATTTATTCCAAGGAGGCTTATGAATCAAGCTCAGAAGAATCACTGAAAGATTCAAGAAAGTGCACCGAGCATGTTGCTGAGAATGAATTGAAGAGTGCTGCAGCATGCTTCAGCCTTACCAGTGTCAACTGA 858 0.4522 MTLKGGITQACAACKFQRRKCTPECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKDLEPSQKKIAMDSIIIQANYRDKYPVRGCWEEICRLQYQIWLAEEELHAVYQQLEICRQHQHQQQHQGIHQGLHHVVPDDLASQLELGMGPRATNNALPLFNHAPPPQQQQQQQQVYNNTTVAAALPVSQQHSYSISNSVDYNSLYIESKENNNNNGTNNPLWQEAAGDYDEMHPFFDTIDDRQSYIYSKEAYESSSEESLKDSRKCTEHVAENELKSAAACFSLTSVN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181596g00007 285 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Stsc181596g00007 285 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Stsc181596g00007 285 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181596g00007 Stsc-Chr181596 49024 50343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181596g00007 1 248 AS2 family AT3G47870 38.411 3.97e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc181596g00007 LOB 2.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181596g00007 - - lang:109357116 363.999