Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181593g00002 ATGTTTTCAAGGTTGATACATCCACACGGCGGTGACGAAGGACTGGAAGATATGATGCTGCCGGGTGGAGGCGGAGGAGGAGGAGGAGGAGAGCCGTGTCTTGTTTTGACGTCTGATCCGAAGCCTCGTCTTCGTTGGACCACTGACCTCCATGAACGCTTCGTTGATGCTGTTACTCAACTCGGCGGTGCTTCCAAAGCTACCCCAAAAGCGATTATGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTGAAGAGTCATCTACAGAAATACAGACTTGGTAAGCAATCAGGAAAAGATTTTGAAGACGGATGCAAGGATGCTTCATATCCTCTAGAGAGTCCGGATAACACATCTCCTGCTTGTGATGCAAATGAGGGCCAAGAAGTTAAGGAGGCATTAAGGGCACAGATGGAAGTTCAAAGTAAACTACATTTGCTAGTAGAGGCAGAGAAGCACTTGCTAATTCGGCAGGATGCGGAGCAGACATATATGGGCATGCTTGAGAGAGCTTGCAAGATGTTGGCTGATCAAGTTATTAGCAATCCAATGGTAGACACAGAGAGCCAAGTGATTGTGATGCCGCCGCAGGGAAGTGAAAGCTGCCTAACATCACTTGCGAACCTGGGTGGATTGACACTGGAAGGATCTCCGAGCGGGGCAAAGAAGAGAATTCTGAATTTAGATTCAGTGGTAGGTCCTTTGATGTGGAATGAAGCTAACATGAGAAGTCAGGGTATCCATCCAAGTCAAGTGAATCCTCATCATGGAATAACTGGGTATGGTATGTAG 798 0.4712 MFSRLIHPHGGDEGLEDMMLPGGGGGGGGGEPCLVLTSDPKPRLRWTTDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFEDGCKDASYPLESPDNTSPACDANEGQEVKEALRAQMEVQSKLHLLVEAEKHLLIRQDAEQTYMGMLERACKMLADQVISNPMVDTESQVIVMPPQGSESCLTSLANLGGLTLEGSPSGAKKRILNLDSVVGPLMWNEANMRSQGIHPSQVNPHHGITGYGM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181593g00002 265 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Stsc181593g00002 265 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
Stsc181593g00002 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 192 IPR044848 GO:0003700
Stsc181593g00002 265 MobiDBLite consensus disorder prediction 1 31 - -
Stsc181593g00002 265 FunFam Myb family transcription factor 40 98 - -
Stsc181593g00002 265 Gene3D - 40 98 - -
Stsc181593g00002 265 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Stsc181593g00002 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Stsc181593g00002 265 Pfam MYB-CC type transfactor, LHEQLE motif 131 176 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181593g00002 Stsc-Chr181593 7726 9958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181593g00002 30 183 G2-like Transcription Factor Family AT3G24120 57.831 8.17e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc181593g00002 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181593g00002 - - adu:107466668 434.876