Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181591g00004 ATGATGTGGATACTGGGATTGTCTATTATTGTGTCTGTTATAGTAATCTATGTATTTCATTGGATTTCTATTCTCAAAGACCCAAAATTCAGAAAAAGATCTTCTCTTCCTCCAGGTTCCATGGGTTTTCCATTCATTGGAGAGACTATTCAGTTCATGATCCCAAGTTACTCATTAGACATTCACCCTTTCATCAGAAAGAGAATTCAGAGATTCGGTCCCATATTTCGAACCAGTTTATTTGGAAAACCGGTTATAATTTCAACGGACCCTGAATTCAACAATTACTTGATTCAGCAAGAAGGTAATTTGGTTGAAAATTATTCGGGTCCTGTCTCTACCCTTCTTGGAAAATTTGGTGTATCTCCTAGTGACATACACAAGTATGTTCGAAGCATCACTCTAAATCATACTGGTCCAGAACGAATCAGAGAAAAGTTGATTACTCAATTTGAAGAGATGATTATCAAGACTTTGAATCAATGGTCAACTCAAACATCTGTTGATGTTAAACAATCTATAACAAAGATGAACTTTCATTTCTTTGCAAAGCATTATTTTGGGTATGATATTGAAAAGTTACCTACCAATACTGAAAGAATATCTGAAGAATTATTCACAGATTTTACAGAAGGGTTCAAGACAATTCCATTAAATATTTATGGAACAAGTTACCACAGATGTTTGCAGGAATGGAAAAAGGCATTTAAAATTGTGAAGAATATGCTGGAAGCAAGGCGCAATTTACCAGAAAAATATCGAGGAGATCTTCTTGACCAAATAATTGATGACTTGGAGAAGGAAAAACCTATGGATGTTCACCAGAATGTGTTACTTATAATAGGGATATGGTTTGCCACTTGTGCTTCAATTTCATTAGCAGTACAATTACTCTTTAAGTTTTTATCAGATGATCCTTCAGTCCTTGAACAACTCAGAGAGGAACATGAGAAAATTCTCACAAGTAGAGACAAAACAAGCTCTTCATTAACATGGAATGAATACAAATCCATGAAATTTACACAGCAGGTAATGAACGAGGCTCTTAGGTTCACAGTTTTGCTTCCTGGACTAATAAGAATAGCATTGAAAGATATTCACTTAAAAGAATATATTATTCCTGCTAATTGGATCATCCTGGTTTTTACTCCAAATCTTCATATGAACTCAGAAATATATAAAGATCCACTTACCTTCAATCCATGGCGCTGGAAAGATCTTGATTCTCTCACCGTGTCAAAAAATTTCAAGCCTTTTGGTGGAGGATTGGGACAGTGTCCAGGAGCTGAGTTAAGTAGAGCTTTCACAGCCACGTTTCTCCATGTTTTGGTCACAAAATATAGGTGGACAAAAATCAAGGGAGGAAAAGTTGTTCGGAATCCCCTTTTGGGAATGAGTGATGGAATTCACATCAAGATTTGGGAGAATGCTGAATAA 1437 0.357 MMWILGLSIIVSVIVIYVFHWISILKDPKFRKRSSLPPGSMGFPFIGETIQFMIPSYSLDIHPFIRKRIQRFGPIFRTSLFGKPVIISTDPEFNNYLIQQEGNLVENYSGPVSTLLGKFGVSPSDIHKYVRSITLNHTGPERIREKLITQFEEMIIKTLNQWSTQTSVDVKQSITKMNFHFFAKHYFGYDIEKLPTNTERISEELFTDFTEGFKTIPLNIYGTSYHRCLQEWKKAFKIVKNMLEARRNLPEKYRGDLLDQIIDDLEKEKPMDVHQNVLLIIGIWFATCASISLAVQLLFKFLSDDPSVLEQLREEHEKILTSRDKTSSSLTWNEYKSMKFTQQVMNEALRFTVLLPGLIRIALKDIHLKEYIIPANWIILVFTPNLHMNSEIYKDPLTFNPWRWKDLDSLTVSKNFKPFGGGLGQCPGAELSRAFTATFLHVLVTKYRWTKIKGGKVVRNPLLGMSDGIHIKIWENAE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181591g00004 478 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 SUPERFAMILY Cytochrome P450 30 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 Pfam Cytochrome P450 37 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181591g00004 478 PANTHER CYTOCHROME P450 26 34 451 - -
Stsc181591g00004 478 Gene3D Cytochrome P450 25 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181591g00004 Stsc-Chr181591 21556 26220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181591g00004 2 473 Cytochrome P450 AT1G12740 41.286 7.84e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181591g00004 - - aip:107619015 756.518