Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181582g00004 ATGGCGGCAGCACCATCTCCACGGGAGGAGAACGTATACATGGCCAAACTCGCCGAGCAGGCAGAGCGGTACGAGGAGATGGTGGAGTTCATGGAAAAGGTCTCGGCCGCCGCCGATAACGAGGAGCTGACGGTGGAGGAGAGGAACCTTCTCTCGGTGGCCTACAAGAACGTCATCGGAGCTAGGCGCGCGTCATGGAGGATTATCTCTTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCAACGTGATCCGTGACTACAGATCCAAGATCGAGTCAGAGCTCTCCAACATCTGCGACGGGATCTTGAAGCTCCTCGACACCCGCCTCATCCCCTCCGCCTCTTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGACTACCACAGGTATCTTGCCGAGTTCAAGACCGGCGCCGAGCGCAAGGAGGCCGCCGAGAGCACCCTCGCCGCTTACAAATCTGCTCAGGTATGTCGATTTTCTTGTTTCTTGTACATATCTGTTATATTTCGGTTCAGATCTGTTAGGCTGGGTCTTGCTCTGAACTTCTCTGTGTTCTACTACGAAATCCTCAACTCTCCTGATCGTGCTTGCAACCTTGCAAAACAGGCTTTTGATGAAGCCATTGCTGAATTGGACACACTTGGAGAGGAATCTTACAAGGATAGCACTTTGATCATGCAACTCCTCCGTGATAACCTCACCCTGTGGACCTCTGATATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCACCTAAACCAGATGAACAGCAGTAA 798 0.5263 MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQVCRFSCFLYISVIFRFRSVRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKPDEQQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181582g00004 265 Coils Coil 14 41 - -
Stsc181582g00004 265 PRINTS 14-3-3 protein zeta signature 190 216 IPR000308 -
Stsc181582g00004 265 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Stsc181582g00004 265 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Stsc181582g00004 265 PRINTS 14-3-3 protein zeta signature 217 246 IPR000308 -
Stsc181582g00004 265 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Stsc181582g00004 265 SMART 1433_4 8 257 IPR023410 -
Stsc181582g00004 265 Gene3D - 2 257 IPR036815 -
Stsc181582g00004 265 FunFam 14-3-3 protein epsilon 4 257 - -
Stsc181582g00004 265 Pfam 14-3-3 protein 14 244 IPR023410 -
Stsc181582g00004 265 PANTHER 14-3-3 PROTEIN 8 248 IPR000308 -
Stsc181582g00004 265 PIRSF 14-3-3 2 256 IPR000308 -
Stsc181582g00004 265 ProSitePatterns 14-3-3 proteins signature 2. 226 245 IPR023409 -
Stsc181582g00004 265 SUPERFAMILY 14-3-3 protein 7 246 IPR036815 -
Stsc181582g00004 265 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181582g00004 Stsc-Chr181582 50015 52174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181582g00004 6 265 14-3-3 family AT1G78300 84.351 4.71e-158 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181582g00004 K06630 - gmx:100792014 456.832