LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc181581g00010	ATGGCTGTTAAATTTGGAAAGGCTTTTGGTTTGAATGTAACAGTTTTCAGCACTAGCATCTCTAAGAAAGATGAGGCCCTCAATCTGCTTGGTGCAGATAACTATGTGATTTCATCTGATCATGAGCAAATGAAAGGATTAACAAAGACACTGGACTTTATAATTGACACTGCATCTGGTGATCATCCTTTTGATCCTTACTTGGCACTTCTGAAAACATTTGGAATCCTAGTTGTAGTTGGGGCTGCAAGTGAAATCAAGTTCAGCCCTAGAAGCCTATTTTTTGGATTGAGGAGTATTTCTGGAAGCGCTGTAGGAGCTATTGAAAGGGCCATCAAAAGTGACGTCAAGTATCGGTTTGTGATTGATATTGAGAACTCCCTAAAGTAA	390	0.3949	MAVKFGKAFGLNVTVFSTSISKKDEALNLLGADNYVISSDHEQMKGLTKTLDFIIDTASGDHPFDPYLALLKTFGILVVVGAASEIKFSPRSLFFGLRSISGSAVGAIERAIKSDVKYRFVIDIENSLK	129

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc181581g00010	129	Gene3D	-	1	110	-	-
	Stsc181581g00010	129	Pfam	Zinc-binding dehydrogenase	1	110	IPR013149	-
	Stsc181581g00010	129	PANTHER	ALDEHYDE REDUCTASE	1	109	IPR047109	GO:0016616
	Stsc181581g00010	129	FunFam	Cinnamyl alcohol dehydrogenase	1	113	-	-
	Stsc181581g00010	129	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1	109	IPR036291	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc181581g00010	Stsc-Chr181581	51077	52228	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc181581g00010	1	129	Monolignol Biosynthesis Gene Families	AT1G72680	57.500	1.80e-56	177

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc181581g00010	K00083		-	ming:122081050	187.963

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