LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc181575g00001	ATGAAGTACTACGAGTATGAGAATTATGACCCTTCATTCCCAGACCAACCGGTGGTTGACCAATACCTACCAATATGGTCTAGGCTACCAGCATTTGGGTCCAAGCCAGCATTCATTTGGGCTCATGATGATAACAATAACACACAACACACCATCCTCACCTACGCCCAACTCAATGCCTCTGTTGACCAAATCTCCTCCCACCTTCTCACTGCTTCCTCTCCTCTTCAAAGAGGTGACACTCTTCTTCTTCTCTCTTCTCCTGGTCTTGACTTTGTTGAACTCATCTTTGCTTCCCAAAGGGCTGGTCTTTTATCTGTCCCTATAGTCCCTCCTCACCCTTGTTTCTCCAATGAAAATTATCACCACCTTCTTAGAGTTATCTCACAGACTAAACCCAAAGCTGCTATTGCTCATTCTTCTTACATTTCATCTATCCAACATTATGTCTCTGATCACAACAACATTAATCTTAACCTTAAACTTGTTCATGCCTTACAAACCATGCAGTGGATTTCCATTGAGGATATCAATAATAAGCATGTTGCTAATAATAATAAAAGAGGTGGATGTGAATCCCTAACATATAATGGTTGCAGGGAGAATGATGTTTATCTTGTTCAGTACACTTCTGGTGCCACCGGGATTCCGAAACCGGTGCTTGTAACGGCGGGTTCAGCCGCACATAACGTGAGAGCTGCTAGAAAAGTCTATGATCTTCACCCAAACACTGTTATTGTTTCATGGCTTCCTCAGTACCATGATGCTGGCCTCATGTTTTTGTTACTAACCATTGTTTCTGGTGCTACTTGTGTTCTTACTTCACCAACTTCCTTCATCAAACGTCCAAGGTTATGGCTTGAATTGATCTCTGAATTCAAGGCCACGTGTACTCCTGTCCCTTCCTTCACCTTGCCGCTGGTTCTCAAACGTGGAGGAGTTGATAAAGGGGTTTCTCCCATTAATCTCTCCCATTTGAGGAACCTTATACTCATCAATGAACCTATTTATAGAGACTCTGTTGAAGAATTTGTTGCAGCCTTGGGTCCCTTTGGGTTAAGCCCTTGTTCTGTTTCTCCTTCTTATGGTTTAGCTGAGAACTGCACCTTTGTTTCAAGTGCATGGAGGAGTGAAAGTGATGTGTATTCTTCTAGTAGCTTCCATGATTTTCCAACTCACAAGAAGCTTCTACCGGTTGCGAGGCTATGTAGGAAGGAGGAGCAAGAAGACATGGAAATCCTGGTGGTTAATGAAGAAACTCATGAGCCAGTTGAGGATGGTGTTGAGGGAGAGATTTGGGTTTCTTCACCAAGCAATGGTTCTGGATATTTAGGTCACCCTTCTTTGACGAGAGAAGTGTTCCATGGAAGACTGAGGAACATGGTGGGAAGATGCTTTCTTAGAACACGTGACACAGGAATTGTGAAAGGAGAGAGGAGATACCTGTTTGTTACTGGAAGGTGTGAAGATGTAATCAAGCTTCAAAATGGTGAAAAGATTATTCATCCTCACTATATTGAATCTGCAGCGTATAACAGTTGCACGAAGCTGCTGAGAGGTGGGTGTGTTGCAGCGTTTGAAGTTTGTGAGAATGTTGTTGCAGTGGTAGCGGAGTTACAGAGAATTGAAGAAGGGGTGATGGTGGATGATGAGGTGTTGAGGAGGATCTGTAATGGGATCAAAGAAGGGGTGTTGAAGAAGGAGAATGTTGAAGTTGGGTGGGTTGTTTTGGTGAAGAGTGAAAGTGTTCCAAAAACGACTTCTGGGAAATTGCAAAGATGGCTTGCTAAGGAGAAGGTTCTTGCAGGGAAGATGAAGGTTGTCATGGAGATGAAATTTGGCGATGATGATGTTAGAAGAAGAACTTCACCAATTGGGTCGTTACTTTCACTTCTTTGA	1899	0.4313	MKYYEYENYDPSFPDQPVVDQYLPIWSRLPAFGSKPAFIWAHDDNNNTQHTILTYAQLNASVDQISSHLLTASSPLQRGDTLLLLSSPGLDFVELIFASQRAGLLSVPIVPPHPCFSNENYHHLLRVISQTKPKAAIAHSSYISSIQHYVSDHNNINLNLKLVHALQTMQWISIEDINNKHVANNNKRGGCESLTYNGCRENDVYLVQYTSGATGIPKPVLVTAGSAAHNVRAARKVYDLHPNTVIVSWLPQYHDAGLMFLLLTIVSGATCVLTSPTSFIKRPRLWLELISEFKATCTPVPSFTLPLVLKRGGVDKGVSPINLSHLRNLILINEPIYRDSVEEFVAALGPFGLSPCSVSPSYGLAENCTFVSSAWRSESDVYSSSSFHDFPTHKKLLPVARLCRKEEQEDMEILVVNEETHEPVEDGVEGEIWVSSPSNGSGYLGHPSLTREVFHGRLRNMVGRCFLRTRDTGIVKGERRYLFVTGRCEDVIKLQNGEKIIHPHYIESAAYNSCTKLLRGGCVAAFEVCENVVAVVAELQRIEEGVMVDDEVLRRICNGIKEGVLKKENVEVGWVVLVKSESVPKTTSGKLQRWLAKEKVLAGKMKVVMEMKFGDDDVRRRTSPIGSLLSLL	632

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc181575g00001	632	Pfam	AMP-binding enzyme	33	495	IPR000873	-
	Stsc181575g00001	632	Gene3D	-	8	488	IPR042099	-
	Stsc181575g00001	632	PANTHER	DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED	9	611	-	-
	Stsc181575g00001	632	SUPERFAMILY	Acetyl-CoA synthetase-like	28	602	-	-
	Stsc181575g00001	632	Gene3D	-	490	621	IPR045851	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc181575g00001	Stsc-Chr181575	1662	3706	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc181575g00001	199	593	Monolignol Biosynthesis Gene Families	AT4G19010	24.938	9.33e-13	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc181575g00001	-		-	gmx:102666455	870.922