Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181568g00001 ATGGGTCGCTGTATCCCTTACCTTCATCTTCTTGTTTCATCTTTTCTTCTTTGTACTTTCTTTCTGAGTTCTGCACAAGCCACCAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTGCAAACCCTTCTTCTTATGACCTTGAATCTGCTACAAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCATGAGAAGGCGAAAGAAGCAATTATTTATTCATATAATAAACACATAAATGGCTTTGCTGCACTACTTGAAGAGGAAGAAGCAGCACAAATTGCAAAAAAGCCAGATGTTGTGTCAGTGTTCTTGAGCAAAGTGCATAAACTACACACTACACGTTCATGGGAGTTTCTTGGACTGCGGAGGAATGGCATCAACACAGCATGGCAGATAGGCAGATATGGTGAAAATACAATCATAGCTAACATTGATACAGGCGTTTGGCCTGAATCTGAGAGCTTCAGGGAGAATGGAATAGGCCCTGTTCCAGCAAAATGGCGTGGAGGTAATGTGTGCCAGATTAACAAATTCAATGGTTCTAACAAACCTCCATGCAACAGGAAACTAATCGGAGCAAGATTCTTCAGCAAAGCTTATGAGGCAAGCATAGGCAGTATTCCACCATCACAGCACACAGCACGTGACTTCGAAGGCCACGGCACCCACACGCTATCAACGGCCGGTGGCAACTTCGTACCCGGCGCAACCGTTTTCGGCAACGCCAATGGCACCGCAAAGGGCGGTTCACCGAGAGCCAGGGTTGCATCCTACAAAGTTTGCTGGTCCACCATAGACGAGACAAGTTGCCTTGGCGCTGACGTGTTGGCCGCCATTGACCAAGCCATCAGCGACGGCGTTGACGTCATCTCTGTTTCTGCTGGTAGCAGCAGGACAGAGATAAACCCTAATGAAATTTTCACTGAAGAGGTTTCCATAGGAGCGTTCCATGCGCTTCTTAGAAACGTTGTTCTTGTTGCGTCTGCTGGTAACTATGGACCCACACCTGAAACCGTTGTGAATGTGGCTCCGTGGCTGTTCACTGTTGCTGCTAGCACCATTGATAGGGACTTCAGCAGTAATATTACTCTTGGTAATAACCAAGTAGTCACTGGAGCCAGTCTTTTCGTAAATTTACCATCCAATCAGTCCTTTCCTTTGATCCTTGCATCTGATGCTAGATTTGCTAATGCCACAATCGAAGATGCACAACTTTGTAAGAATGGAACCCTTGATCCTGCAAAAGTAAGTGGCAAAATAGTCATATGCCTTCGAGGTGGGAAAATAAGATCGGTTGCAGAAGGCCAAGAAGCTTTATCTGCAGGTGCAGTTGGAATGGTTTTGGAAAACGATGATCAGAGTGGAAATACAGTTCTAGCTGAGCCTCATGTTTTGTCCACTACAAATACGCCAAAAACTAATGAGGGCCCAAACCCTCATGATTATTACAACAGTACCGAGAGCCCTATTGTTAGCATGTCAGCAGCAAAAACTTTGCTTGGAATAAAGCCAGCTCCAGTTATGGCCTCATTCTCATCTAGAGGTCCAAATCCTATTCAACCATCAATACTCAAGCCTGATATAACTGCACCAGGGGTGAACATACTAGCATCATATTCCTTAGCAGCAAGTTTATCTAATTTGCCATCGGACACGCGCCGCGGATTTCGTTTCAATGTTCTGCAAGGAACTTCTATGTCATGCCCTCATGTCTCTGGCGTTGCTGGTCTTCTCAAAACTCGTCATCCTAACTGGACTCCTGCAGCTATCAAATCTGCAATCATGACCACAGCAACTACACAAGATAACACCAATGGACCTATTCAAGATGCAGATAATACATTAGCTACACCTTTTGCTTATGGTTCAGGACATGTTCAACCAGACTTAGCCATGGACCCTGGACTTGTTTATGACATTACCATTTATGATTACTTGAACTTCTTATGTGCTTCCGGATACAGTGAAAACCTCATTGCATCACTCATTTTCAACAAGACCTTCGTATGCTATGGATCTCACAGAGTAACAGATTTAAATTACCCTTCAATCACATTGCCAAATCTCGGATCTAGCGCAGAGAATGTTACTCGCACGGTTACTAATGTTGGACCTCCAAGCACATATGTTGCAAGTGCAGAGTTACCTGGATTTAACATTGTTGTGGTACCAAGTTCCTTAACGTTCAAGAGAGTTGGTGAGAAGAAGAGGTTCCAAGTAATTGTAGAGGCAACAAGTGAGAGTCCGAAAGGGAGTTATGAATTTGGAGAGCTGAAATGGACAAATGGGAACCACATTGTTAGAAGTCCAATTGTTGTGAGGCTCATATCATCTGAGTTGAGAAGTGCATACTAA 2370 0.4405 MGRCIPYLHLLVSSFLLCTFFLSSAQATKKCYIVYLGAHSHGANPSSYDLESATNSHYDLLSSTLGSHEKAKEAIIYSYNKHINGFAALLEEEEAAQIAKKPDVVSVFLSKVHKLHTTRSWEFLGLRRNGINTAWQIGRYGENTIIANIDTGVWPESESFRENGIGPVPAKWRGGNVCQINKFNGSNKPPCNRKLIGARFFSKAYEASIGSIPPSQHTARDFEGHGTHTLSTAGGNFVPGATVFGNANGTAKGGSPRARVASYKVCWSTIDETSCLGADVLAAIDQAISDGVDVISVSAGSSRTEINPNEIFTEEVSIGAFHALLRNVVLVASAGNYGPTPETVVNVAPWLFTVAASTIDRDFSSNITLGNNQVVTGASLFVNLPSNQSFPLILASDARFANATIEDAQLCKNGTLDPAKVSGKIVICLRGGKIRSVAEGQEALSAGAVGMVLENDDQSGNTVLAEPHVLSTTNTPKTNEGPNPHDYYNSTESPIVSMSAAKTLLGIKPAPVMASFSSRGPNPIQPSILKPDITAPGVNILASYSLAASLSNLPSDTRRGFRFNVLQGTSMSCPHVSGVAGLLKTRHPNWTPAAIKSAIMTTATTQDNTNGPIQDADNTLATPFAYGSGHVQPDLAMDPGLVYDITIYDYLNFLCASGYSENLIASLIFNKTFVCYGSHRVTDLNYPSITLPNLGSSAENVTRTVTNVGPPSTYVASAELPGFNIVVVPSSLTFKRVGEKKRFQVIVEATSESPKGSYEFGELKWTNGNHIVRSPIVVRLISSELRSAY 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181568g00001 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Stsc181568g00001 789 Gene3D - 654 781 - -
Stsc181568g00001 789 CDD PA_subtilisin_like 366 497 - -
Stsc181568g00001 789 Pfam PA domain 400 474 IPR003137 -
Stsc181568g00001 789 FunFam Subtilisin-like protease SBT1.5 143 371 - -
Stsc181568g00001 789 SUPERFAMILY Subtilisin-like 115 641 IPR036852 GO:0004252|GO:0006508
Stsc181568g00001 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 116 IPR037045 -
Stsc181568g00001 789 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Stsc181568g00001 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 778 IPR045051 -
Stsc181568g00001 789 FunFam subtilisin-like protease SBT1.5 360 505 - -
Stsc181568g00001 789 ProSiteProfiles Serine proteases, subtilase domain profile. 120 637 - -
Stsc181568g00001 789 Pfam Fibronectin type-III domain 683 778 IPR041469 -
Stsc181568g00001 789 Gene3D - 360 505 - -
Stsc181568g00001 789 SUPERFAMILY PA domain 385 505 IPR046450 -
Stsc181568g00001 789 Pfam Subtilase family 141 609 IPR000209 GO:0006508|GO:0008236
Stsc181568g00001 789 Gene3D Peptidase S8/S53 domain 144 650 IPR036852 GO:0004252|GO:0006508
Stsc181568g00001 789 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Stsc181568g00001 789 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Stsc181568g00001 789 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Stsc181568g00001 789 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Stsc181568g00001 789 CDD Peptidases_S8_3 113 604 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181568g00001 Stsc-Chr181568 1629 6202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181568g00001 32 780 Subtilisin-like Serine Gene Family AT2G04160 52.848 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181568g00001 - - gmx:100803751 1163.29