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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc181567g00006
ATGGCATCAGAGAAGAAGCTTGCGAACCCAATGAGGGAAATCAAAGTGCAGAAGCTTGTCCTCAACATCTCCGTCGGCGAGAGTGGCGATCGTCTCACCAGAGCTGCCAAGGTCTTGGAACAGCTCAGCGGCCAAACCCCTGTCTTCTCCAAGGCTAGGTACACTGTGCGTTCATTTGGAATCAGGCGTAATGAAAAGATTGCTTGCTATGTCACCGTTAGAGGTGACAAGGCCATGCAGCTCCTTGAGAGTGGGTTGAAGGTCAAGGAGTATGAATTGCTTAGGAGGAATTTCAGCGATACTGGCTGCTTTGGTTTTGGAATCCAGGAGCACATCGATCTTGGAATCAAGTATGATCCTTCTACTGGTATCTACGGCATGGATTTCTTTGTCGTCTTAGAGCGTGCGGGATACCGTGTGGGTAGGCGTAGGAGATGCAAGTCCCGTGTTGGAATTCAGCACAGGGTCACCAAAGAGGATGCAATGAAGTGGTTTCAAGTTAAGTATGAAGGGGTTATTCTTAACAAGTCCCAACAAATTGTATGA
546
0.4817
MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIV
181
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc181567g00006
181
Pfam
Ribosomal protein L5
9
62
IPR031310
-
Stsc181567g00006
181
Gene3D
-
2
177
IPR022803
-
Stsc181567g00006
181
Pfam
ribosomal L5P family C-terminus
66
164
IPR031309
-
Stsc181567g00006
181
PIRSF
RPL5p_RPL5a_RPL11e_RPL5o
1
172
IPR002132
GO:0003735|GO:0005840|GO:0006412
Stsc181567g00006
181
SUPERFAMILY
RL5-like
9
173
IPR022803
-
Stsc181567g00006
181
PANTHER
60S RIBOSOMAL PROTEIN L11-RELATED
2
176
IPR002132
GO:0003735|GO:0005840|GO:0006412
Stsc181567g00006
181
ProSitePatterns
Ribosomal protein L5 signature.
39
55
IPR020929
GO:0003735|GO:0005840|GO:0006412
Stsc181567g00006
181
FunFam
60S ribosomal protein L11
2
174
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc181567g00006
Stsc-Chr181567
22808
24122
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc181567g00006
1
181
Cytoplasmic Ribosomal Protein Gene Family
AT5G45775
93.923
7.88e-128
355
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc181567g00006
K02868
-
gmx:100810082
339.347
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