Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181564g00006 ATGGGCAAGAAAATGAAGCTTCTTCCCTCTCTTCTCAAGAACACCACTTCTTCTTCTTCTTCTTCTTCTTGGGCTTGGCCTTCTTGTCACCAACCAAAAACCCCCTCTTTCAGAGCCAACAAAGATATTTTCAAGACCTACTTTGACACCACCGCCGCCATGGAAACACTTGTTCTCGACACCTCCGACGACCACCACTCATTCTTCACTGACTCCGCCAGCTTCTCAACCACTTCCCTCGACGACGATTACTCATCGCCGTCAACCAAAGACGACTCCTCTCTCGAGACCGTCATTCGCGGCTTGCGCCACCGCTCCGACCGCTTGTTCTTCGATCCAGACCACGCCAGTTCCATCGTAGAATCAAAATCAAGAACCACCGGAATAACAGGAACGGGAACAGAAACTCCGGAAGCGTCGTCATCGTTGGCGTTCAAGGACAGCGTGGTGTTGTCCATGGAGTCACGAGATCCTTACGTAGATTTCAGAAAGTCGATGGAGGAGATGGTGGAGGCTCATGGTGTTGGAGATTGGGAAGGTCTGGAAGAGCTTCTTGGTTGGTACTTGAAGGCTAATGGGAAGAGCAACCATGGTTATATTGTTGGTGCTTTCATTGATTTGTTGCTCTCTCTTACACTTTCTTCTTCTTCTAATAATATCGCTTCATCCTCATCAAATTCTGATTCTCCTTCTTCTTCTTCTTCCTCTTCTTATTCTCCTTCTTCTCCTTTGTCCTTTTATAGCTCTTCACTCTCTTCCTCTGATTGTGTTTCTTGTTTGGAAGCCCAACAACAAGAACAGATCCATCATCATCATAATCATGCTGATGATGATACCCCTGTGTTGGAGCAAGATAAGGAGGAGATCAAATACGAAAATGTGAATGTCCCTTCTTCTTCTTCATCACAAGTCTAA 915 0.4612 MGKKMKLLPSLLKNTTSSSSSSSWAWPSCHQPKTPSFRANKDIFKTYFDTTAAMETLVLDTSDDHHSFFTDSASFSTTSLDDDYSSPSTKDDSSLETVIRGLRHRSDRLFFDPDHASSIVESKSRTTGITGTGTETPEASSSLAFKDSVVLSMESRDPYVDFRKSMEEMVEAHGVGDWEGLEELLGWYLKANGKSNHGYIVGAFIDLLLSLTLSSSSNNIASSSSNSDSPSSSSSSSYSPSSPLSFYSSSLSSSDCVSCLEAQQQEQIHHHHNHADDDTPVLEQDKEEIKYENVNVPSSSSSQV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181564g00006 304 ProSiteProfiles OVATE domain profile. 151 210 IPR006458 -
Stsc181564g00006 304 MobiDBLite consensus disorder prediction 265 292 - -
Stsc181564g00006 304 NCBIfam uncharacterized plant-specific domain TIGR01568 149 212 IPR006458 -
Stsc181564g00006 304 MobiDBLite consensus disorder prediction 219 251 - -
Stsc181564g00006 304 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 67 213 IPR038933 GO:0045892
Stsc181564g00006 304 MobiDBLite consensus disorder prediction 263 304 - -
Stsc181564g00006 304 Pfam Transcriptional repressor, ovate 155 211 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181564g00006 Stsc-Chr181564 45838 46752 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc181564g00006 Ovate 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181564g00006 - - ahf:112754577 266.929