Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181563g00010 ATGAAGGAAGGGGATTGCGTTGAGTCCTATATTGTCTACTTGGGATCTCAATCTTTTGGTCAAGATCCTACATTAGTTGATGCTGAATATGTCACAAACTCTCACTATAATTTACTTGGATCTTATGTTGGAAGCTTTGAGAAGGCCAAAGAAGCAATCTTTTACTCTTATAACAAATACTTCAATGGTTTTGCTGCAGTGCTTGATGAGGAAGAAGCAGCCAAGATTGCAAAACATACAGAAGTATTATCAGTCTTCCCAAACAAACGAAGACAACTGCACACAACCCATTCATGGAGTTTTCTTGGATTAGGAACAGATGGTGCATTTGCAGAGCAATCAATATGGAAGGAGTCCTTGGGTCAAGATGTTATCATTGCAAACTTGGACACCGGTGTGTGGCCTGAATCAAAGAGTTTTAACGATGAAGGGTTTGGGCCAATTCCAAAAAGATGGCGTGGAATTTGTCAAGTCGATGACAAGAATTCATTTAAATTTCACTGCAACAGGAAACTGATTGGAGCAAGATATTTTAACAAAGGCTACATCGCAGCTGTTGGGACAAACCACCCCAATACTACTCGTGACTTTGAAGGTCATGGTTCACATACCCTATCCACTGCAGGTGGCAACTTTGTTCCGGGAGTGAACGTATTGGGAAACGGTAACGGAACAGCAAGTGGTGGATCACCAAAAGCTCGCGTAGCAGCATACAAAGTTTGTTGGCCGCAAGAGAGTGACGGAACTGGCGGAGGTTGTTTCGATGCAGACATTTTGGCTGCATTTGAAGCAGCCATAAGTGATGGTGTTGATGTAATATCAGTATCACTGGGAAGTGATGTTCCTTCAGAGTTTTTCCAAAGCGGCACTTCCATTGGCTCTTTCCATGCTGCAGTTCTGCATGGCATAACTGTTGTGTCTTCAGCTGGAAACAGTGGGCCATCTTTATCTACTGTGAGCAACTATGAGCCATGGGTCATCACTGTTGCTGCAAGCACCATTGATAGAGCTTTTGGTAACCGCATCCTTCTTGGTGGTGATAACAAAATTGTCAGGGGAACAAGCCTTTCCGAGTTTGCTTTGCCATATAGCAAGTTTTACCCATTGATCAAGGCCGTTGATGCTAAAGTTGCCACTGCAAATGACATACAAGCGAGTCAATGCCAAGCTGGAACTCTTGATCCAAAGAAGGCAAAGGGGAAAATAGTGGTTTGTGTTCGTGGTGTGAATGCAAGAGTTGCCAAAGGGGCTGAAGCTGCTCGTGCTGGAGCTACTGGAATGATTTTGGTTAATACTGAATTAGCAGATGATCTTGAAGCTGATCCTCATCTCATTCTTGCCTCACAAGTTCATTTTGATGAGGGCAATTATGTCTTTTCCTACATTAACCGAACCATATCCCCTGTGGCTTCCATTTCTGGAGTGAGAACATTATTGGGCACTAAACCAGCTCCAGTTATAGCTTCATTTTCATCAAGAGGGCCAAGTCCCCTTGAGCCATCAATCCTTAAGCCGGACATTACTGCTCCAGGAGTGGATATCATTGCAGCTTACACTGAAGGTTTACCTCCATCAGAACAAGCATCTGATAAACGTAGAACTCCTTACATTACCATGTCAGGCACTTCAATGTCATGTCCTCATGTTTCCGGTGTTGTTGGCCTCCTCAAATCACTTCATCCTCATTGGAGTCCGGCAGCTATTAAGTCTGCAATCATAACCACAGCAAGAGCAAGAGACAACACTGGAGGGACAATTCTGGAATCAGAAACAGAGAGGGGAACTCCATTTGCTTATGGTGCAGGTCACATTTCCCCAAATCTTGCAGCATATCCAGGACTTGTATATGATCTTACTATCATTGATCACCTAAACTTCTTGTGTGGTCATGGTTACACTGGTGCTCAAATAAGAATATTCATTGGCAAGAAATACATTTGTCCAGAGATTCTTGACCCAGCAGATTTCAACTACCCATCTATAACGGTTTCTCACTTTTCCAATTCAACTGCTTCTCGCCACGTGACTCGCACGGTTACAAATGTTGGTTCACCAGGAACATACAAAGTGAGTGTCACATCACCCCCTGAAGCTGTTATTTCAGTTGATCCTGAGATTCTAAGATTCAAGAGAAAAGGTGAAAAGAAGAGTTTCACAGTTACAATAACTTTGAGGTCACTGGGAAACCAGAATCATAATTATACATTTGGAGATTTGGTTTGGAGTGATGGCAAGAACCATGTTAGGAGTCCCATTGTGATTAAGCTTCCATTATAG 2277 0.4295 MKEGDCVESYIVYLGSQSFGQDPTLVDAEYVTNSHYNLLGSYVGSFEKAKEAIFYSYNKYFNGFAAVLDEEEAAKIAKHTEVLSVFPNKRRQLHTTHSWSFLGLGTDGAFAEQSIWKESLGQDVIIANLDTGVWPESKSFNDEGFGPIPKRWRGICQVDDKNSFKFHCNRKLIGARYFNKGYIAAVGTNHPNTTRDFEGHGSHTLSTAGGNFVPGVNVLGNGNGTASGGSPKARVAAYKVCWPQESDGTGGGCFDADILAAFEAAISDGVDVISVSLGSDVPSEFFQSGTSIGSFHAAVLHGITVVSSAGNSGPSLSTVSNYEPWVITVAASTIDRAFGNRILLGGDNKIVRGTSLSEFALPYSKFYPLIKAVDAKVATANDIQASQCQAGTLDPKKAKGKIVVCVRGVNARVAKGAEAARAGATGMILVNTELADDLEADPHLILASQVHFDEGNYVFSYINRTISPVASISGVRTLLGTKPAPVIASFSSRGPSPLEPSILKPDITAPGVDIIAAYTEGLPPSEQASDKRRTPYITMSGTSMSCPHVSGVVGLLKSLHPHWSPAAIKSAIITTARARDNTGGTILESETERGTPFAYGAGHISPNLAAYPGLVYDLTIIDHLNFLCGHGYTGAQIRIFIGKKYICPEILDPADFNYPSITVSHFSNSTASRHVTRTVTNVGSPGTYKVSVTSPPEAVISVDPEILRFKRKGEKKSFTVTITLRSLGNQNHNYTFGDLVWSDGKNHVRSPIVIKLPL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181563g00010 758 CDD PA_subtilisin_like 343 472 - -
Stsc181563g00010 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Stsc181563g00010 758 Gene3D Peptidase S8/S53 domain 123 622 IPR036852 GO:0004252|GO:0006508
Stsc181563g00010 758 Pfam Subtilase family 121 602 IPR000209 GO:0006508|GO:0008236
Stsc181563g00010 758 SUPERFAMILY Subtilisin-like 93 613 IPR036852 GO:0004252|GO:0006508
Stsc181563g00010 758 FunFam Subtilisin-like protease SBT1.5 123 343 - -
Stsc181563g00010 758 Gene3D - 335 479 - -
Stsc181563g00010 758 Pfam Fibronectin type-III domain 655 754 IPR041469 -
Stsc181563g00010 758 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Stsc181563g00010 758 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Stsc181563g00010 758 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Stsc181563g00010 758 FunFam Subtilisin-like protease SBT1.5 627 757 - -
Stsc181563g00010 758 Pfam Peptidase inhibitor I9 9 94 IPR010259 -
Stsc181563g00010 758 CDD Peptidases_S8_3 92 576 IPR034197 -
Stsc181563g00010 758 Gene3D - 627 756 - -
Stsc181563g00010 758 FunFam subtilisin-like protease SBT1.5 335 479 - -
Stsc181563g00010 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 94 IPR037045 -
Stsc181563g00010 758 ProSiteProfiles Serine proteases, subtilase domain profile. 98 610 - -
Stsc181563g00010 758 Pfam PA domain 379 456 IPR003137 -
Stsc181563g00010 758 FunFam Subtilisin-like protease SBT5.3 2 94 - -
Stsc181563g00010 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 753 IPR045051 -
Stsc181563g00010 758 SUPERFAMILY PA domain 370 464 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181563g00010 Stsc-Chr181563 45562 51742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181563g00010 9 756 Subtilisin-like Serine Gene Family AT2G04160 55.556 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181563g00010 - - vvo:131629798 908.286